Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 AC090616.6-201ENST00000582640 721 ntBASIC19.03■□□□□ 0.64
HPS4Q9NQG7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 IGHGP-201ENST00000390555 1178 ntBASIC19.02■□□□□ 0.64
HPS4Q9NQG7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 GPR32P1-201ENST00000601788 811 ntBASIC19.02■□□□□ 0.64
HPS4Q9NQG7 AL121772.3-201ENST00000610840 674 ntBASIC19.02■□□□□ 0.64
HPS4Q9NQG7 IGHV3-41-201ENST00000613121 348 ntBASIC19.02■□□□□ 0.64
HPS4Q9NQG7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HPS4Q9NQG7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HPS4Q9NQG7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.02■□□□□ 0.63
HPS4Q9NQG7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HPS4Q9NQG7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HPS4Q9NQG7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 KRT18P31-201ENST00000506277 1292 ntBASIC19.01■□□□□ 0.63
HPS4Q9NQG7 AC091304.2-201ENST00000564639 760 ntBASIC19.01■□□□□ 0.63
HPS4Q9NQG7 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 AL031008.1-201ENST00000619963 541 ntBASIC19.01■□□□□ 0.63
HPS4Q9NQG7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HPS4Q9NQG7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19■□□□□ 0.63
HPS4Q9NQG7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HPS4Q9NQG7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
HPS4Q9NQG7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19■□□□□ 0.63
HPS4Q9NQG7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19■□□□□ 0.63
HPS4Q9NQG7 AC009078.2-202ENST00000463353 338 ntBASIC19■□□□□ 0.63
HPS4Q9NQG7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19■□□□□ 0.63
HPS4Q9NQG7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19■□□□□ 0.63
HPS4Q9NQG7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19■□□□□ 0.63
HPS4Q9NQG7 AC104692.2-201ENST00000603054 253 ntBASIC19■□□□□ 0.63
HPS4Q9NQG7 AC233702.3-201ENST00000578656 1387 ntBASIC19■□□□□ 0.63
HPS4Q9NQG7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms