Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 AL049812.1-201ENST00000432563 2267 ntBASIC21.42■■□□□ 1.02
SH2D4AQ9H788 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 AC233702.3-201ENST00000578656 1387 ntBASIC21.42■■□□□ 1.02
SH2D4AQ9H788 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.42■■□□□ 1.02
SH2D4AQ9H788 LINC01711-201ENST00000598340 967 ntBASIC21.42■■□□□ 1.02
SH2D4AQ9H788 AC124864.1-201ENST00000623408 392 ntBASIC21.42■■□□□ 1.02
SH2D4AQ9H788 AP000974.1-201ENST00000623909 2387 ntBASIC21.42■■□□□ 1.02
SH2D4AQ9H788 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 TSPY19P-201ENST00000418461 509 ntBASIC21.41■■□□□ 1.02
SH2D4AQ9H788 TSPY18P-201ENST00000441642 509 ntBASIC21.41■■□□□ 1.02
SH2D4AQ9H788 RN7SL606P-201ENST00000472779 293 ntBASIC21.41■■□□□ 1.02
SH2D4AQ9H788 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.41■■□□□ 1.02
SH2D4AQ9H788 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 AC091304.2-201ENST00000564639 760 ntBASIC21.4■■□□□ 1.02
SH2D4AQ9H788 AC074051.2-201ENST00000565115 352 ntBASIC21.4■■□□□ 1.02
SH2D4AQ9H788 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.4■■□□□ 1.02
SH2D4AQ9H788 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH2D4AQ9H788 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH2D4AQ9H788 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.39■■□□□ 1.02
SH2D4AQ9H788 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH2D4AQ9H788 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.39■■□□□ 1.02
SH2D4AQ9H788 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SH2D4AQ9H788 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH2D4AQ9H788 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH2D4AQ9H788 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH2D4AQ9H788 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH2D4AQ9H788 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 AC113404.2-201ENST00000507884 177 ntBASIC21.39■■□□□ 1.01
SH2D4AQ9H788 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 IFNL4P1-201ENST00000607083 540 ntBASIC21.39■■□□□ 1.01
SH2D4AQ9H788 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2D4AQ9H788 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
SH2D4AQ9H788 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH2D4AQ9H788 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.38■■□□□ 1.01
SH2D4AQ9H788 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms