Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.16■□□□□ 0.98
RPAP3Q9H6T3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPAP3Q9H6T3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.16■□□□□ 0.98
RPAP3Q9H6T3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 AC096582.2-201ENST00000510860 516 ntBASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 AC008687.5-201ENST00000593746 558 ntBASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 AL024508.2-201ENST00000607749 1894 ntBASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RPAP3Q9H6T3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
RPAP3Q9H6T3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RPAP3Q9H6T3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.14■□□□□ 0.98
RPAP3Q9H6T3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RPAP3Q9H6T3 AC112777.1-201ENST00000540175 1423 ntBASIC21.14■□□□□ 0.98
RPAP3Q9H6T3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 HLA-A-201ENST00000376802 1334 ntBASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 MIR5100-201ENST00000579544 119 ntBASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 AL591684.3-201ENST00000605187 298 ntBASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 TP73-AS1-207ENST00000624167 988 ntBASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 AL499627.1-201ENST00000569373 2188 ntBASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPAP3Q9H6T3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.13■□□□□ 0.97
RPAP3Q9H6T3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 AC116562.4-201ENST00000641316 2276 ntBASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms