Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 TOB2P1-201ENST00000469761 992 ntBASIC19.05■□□□□ 0.64
RNF38Q9H0F5 RN7SL606P-201ENST00000472779 293 ntBASIC19.05■□□□□ 0.64
RNF38Q9H0F5 AP000867.3-201ENST00000524675 377 ntBASIC19.05■□□□□ 0.64
RNF38Q9H0F5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 AC004263.2-201ENST00000617183 678 ntBASIC19.04■□□□□ 0.64
RNF38Q9H0F5 AC124864.1-201ENST00000623408 392 ntBASIC19.04■□□□□ 0.64
RNF38Q9H0F5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF38Q9H0F5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 NUS1P1-201ENST00000446295 882 ntBASIC19.03■□□□□ 0.64
RNF38Q9H0F5 UNC93B7-201ENST00000509439 705 ntBASIC19.03■□□□□ 0.64
RNF38Q9H0F5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF38Q9H0F5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 AL592071.1-201ENST00000611956 408 ntBASIC19.02■□□□□ 0.64
RNF38Q9H0F5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF38Q9H0F5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.02■□□□□ 0.63
RNF38Q9H0F5 ANO7L1-203ENST00000602586 1720 ntBASIC19.02■□□□□ 0.63
RNF38Q9H0F5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF38Q9H0F5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.02■□□□□ 0.63
RNF38Q9H0F5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF38Q9H0F5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 AL024508.2-201ENST00000607749 1894 ntBASIC19.01■□□□□ 0.63
RNF38Q9H0F5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 GUSBP12-201ENST00000513727 720 ntBASIC19.01■□□□□ 0.63
RNF38Q9H0F5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms