Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 LINC02228-203ENST00000641970 1355 ntBASIC14.95□□□□□ -0.02
NKX6-2Q9C056 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-2Q9C056 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 AL162412.1-201ENST00000567129 965 ntBASIC14.94□□□□□ -0.02
NKX6-2Q9C056 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 AL591742.1-201ENST00000604433 565 ntBASIC14.94□□□□□ -0.02
NKX6-2Q9C056 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 AC105020.1-201ENST00000435356 2205 ntBASIC14.94□□□□□ -0.02
NKX6-2Q9C056 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX6-2Q9C056 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 LINC00602-201ENST00000629776 2065 ntBASIC14.93□□□□□ -0.02
NKX6-2Q9C056 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 PCDHB17P-201ENST00000539533 2393 ntBASIC14.93□□□□□ -0.02
NKX6-2Q9C056 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
NKX6-2Q9C056 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms