Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXB1Q99853 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXB1Q99853 GCSHP2-201ENST00000560971 527 ntBASIC16.21■□□□□ 0.19
FOXB1Q99853 AC139887.4-201ENST00000607877 719 ntBASIC16.21■□□□□ 0.19
FOXB1Q99853 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXB1Q99853 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXB1Q99853 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.21■□□□□ 0.19
FOXB1Q99853 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.21■□□□□ 0.19
FOXB1Q99853 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXB1Q99853 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FOXB1Q99853 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.21■□□□□ 0.18
FOXB1Q99853 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FOXB1Q99853 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FOXB1Q99853 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXB1Q99853 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXB1Q99853 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FOXB1Q99853 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FOXB1Q99853 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
FOXB1Q99853 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.2■□□□□ 0.18
FOXB1Q99853 AC117947.1-201ENST00000427448 529 ntBASIC16.2■□□□□ 0.18
FOXB1Q99853 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXB1Q99853 YBX1P2-201ENST00000489612 999 ntBASIC16.2■□□□□ 0.18
FOXB1Q99853 AC034232.1-201ENST00000506026 1064 ntBASIC16.2■□□□□ 0.18
FOXB1Q99853 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXB1Q99853 MIR3917-201ENST00000580971 93 ntBASIC16.2■□□□□ 0.18
FOXB1Q99853 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
FOXB1Q99853 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXB1Q99853 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FOXB1Q99853 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
FOXB1Q99853 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
FOXB1Q99853 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXB1Q99853 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXB1Q99853 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FOXB1Q99853 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 RCN1P1-201ENST00000400413 996 ntBASIC16.19■□□□□ 0.18
FOXB1Q99853 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
FOXB1Q99853 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXB1Q99853 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXB1Q99853 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXB1Q99853 AL441883.1-201ENST00000566170 1045 ntBASIC16.19■□□□□ 0.18
FOXB1Q99853 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXB1Q99853 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FOXB1Q99853 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
FOXB1Q99853 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXB1Q99853 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
FOXB1Q99853 AC099343.3-201ENST00000605834 2503 ntBASIC16.19■□□□□ 0.18
FOXB1Q99853 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXB1Q99853 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 HTR7P1-202ENST00000624664 4411 ntBASIC16.19■□□□□ 0.18
FOXB1Q99853 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXB1Q99853 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXB1Q99853 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXB1Q99853 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXB1Q99853 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXB1Q99853 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXB1Q99853 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXB1Q99853 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXB1Q99853 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXB1Q99853 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXB1Q99853 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms