Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.04■□□□□ 0.48
NPAS2Q99743 LINC01023-201ENST00000606054 436 ntBASIC18.04■□□□□ 0.48
NPAS2Q99743 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.04■□□□□ 0.48
NPAS2Q99743 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NPAS2Q99743 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NPAS2Q99743 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.04■□□□□ 0.48
NPAS2Q99743 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.03■□□□□ 0.48
NPAS2Q99743 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 HEIH-201ENST00000623091 1652 ntBASIC18.03■□□□□ 0.48
NPAS2Q99743 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
NPAS2Q99743 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.03■□□□□ 0.48
NPAS2Q99743 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.03■□□□□ 0.48
NPAS2Q99743 AC004980.1-204ENST00000429707 299 ntBASIC18.03■□□□□ 0.48
NPAS2Q99743 TSPY23P-201ENST00000440136 739 ntBASIC18.03■□□□□ 0.48
NPAS2Q99743 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.03■□□□□ 0.48
NPAS2Q99743 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.03■□□□□ 0.48
NPAS2Q99743 HLA-A-209ENST00000638375 975 ntBASIC18.03■□□□□ 0.48
NPAS2Q99743 AC097493.4-201ENST00000641197 219 ntBASIC18.03■□□□□ 0.48
NPAS2Q99743 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.03■□□□□ 0.48
NPAS2Q99743 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NPAS2Q99743 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 AC134043.2-201ENST00000624206 2238 ntBASIC18.03■□□□□ 0.48
NPAS2Q99743 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
NPAS2Q99743 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.02■□□□□ 0.48
NPAS2Q99743 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPAS2Q99743 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPAS2Q99743 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPAS2Q99743 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPAS2Q99743 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPAS2Q99743 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPAS2Q99743 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPAS2Q99743 MMP23A-201ENST00000234610 1017 ntBASIC18.02■□□□□ 0.48
NPAS2Q99743 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.02■□□□□ 0.48
NPAS2Q99743 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
NPAS2Q99743 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.02■□□□□ 0.48
NPAS2Q99743 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPAS2Q99743 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.02■□□□□ 0.48
NPAS2Q99743 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.02■□□□□ 0.48
NPAS2Q99743 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPAS2Q99743 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.02■□□□□ 0.48
NPAS2Q99743 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
NPAS2Q99743 AL031985.4-201ENST00000642138 673 ntBASIC18.02■□□□□ 0.48
NPAS2Q99743 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NPAS2Q99743 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
NPAS2Q99743 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NPAS2Q99743 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
NPAS2Q99743 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.02■□□□□ 0.47
NPAS2Q99743 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS2Q99743 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS2Q99743 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
NPAS2Q99743 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS2Q99743 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS2Q99743 LINC00896-202ENST00000609602 2128 ntBASIC18.01■□□□□ 0.47
NPAS2Q99743 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS2Q99743 UNC93B2-201ENST00000285383 730 ntBASIC18.01■□□□□ 0.47
NPAS2Q99743 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NPAS2Q99743 AL390955.1-201ENST00000428694 934 ntBASIC18.01■□□□□ 0.47
NPAS2Q99743 AC011506.1-201ENST00000474329 610 ntBASIC18.01■□□□□ 0.47
NPAS2Q99743 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.01■□□□□ 0.47
NPAS2Q99743 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS2Q99743 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS2Q99743 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.01■□□□□ 0.47
NPAS2Q99743 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.01■□□□□ 0.47
NPAS2Q99743 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.01■□□□□ 0.47
NPAS2Q99743 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS2Q99743 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS2Q99743 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS2Q99743 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS2Q99743 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.01■□□□□ 0.47
NPAS2Q99743 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS2Q99743 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.01■□□□□ 0.47
NPAS2Q99743 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPAS2Q99743 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.01■□□□□ 0.47
NPAS2Q99743 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NPAS2Q99743 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.01■□□□□ 0.47
NPAS2Q99743 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms