Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.26□□□□□ -0.45
LITAFQ99732 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LITAFQ99732 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.26□□□□□ -0.45
LITAFQ99732 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.26□□□□□ -0.45
LITAFQ99732 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.26□□□□□ -0.45
LITAFQ99732 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.26□□□□□ -0.45
LITAFQ99732 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
LITAFQ99732 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.26□□□□□ -0.45
LITAFQ99732 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LITAFQ99732 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.26□□□□□ -0.45
LITAFQ99732 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.26□□□□□ -0.45
LITAFQ99732 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LITAFQ99732 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
LITAFQ99732 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 PCDHA14-201ENST00000506751 2298 ntBASIC12.25□□□□□ -0.45
LITAFQ99732 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC12.25□□□□□ -0.45
LITAFQ99732 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.25□□□□□ -0.45
LITAFQ99732 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.25□□□□□ -0.45
LITAFQ99732 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 AC005181.1-201ENST00000604782 1256 ntBASIC12.25□□□□□ -0.45
LITAFQ99732 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 AL121906.2-201ENST00000621597 723 ntBASIC12.25□□□□□ -0.45
LITAFQ99732 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.25□□□□□ -0.45
LITAFQ99732 HCG11-201ENST00000411553 5696 ntBASIC12.25□□□□□ -0.45
LITAFQ99732 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.25□□□□□ -0.45
LITAFQ99732 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.25□□□□□ -0.45
LITAFQ99732 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 GMCL1P1-201ENST00000463439 1581 ntBASIC12.25□□□□□ -0.45
LITAFQ99732 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.25□□□□□ -0.45
LITAFQ99732 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LITAFQ99732 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.25□□□□□ -0.45
LITAFQ99732 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LITAFQ99732 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.24□□□□□ -0.45
LITAFQ99732 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LITAFQ99732 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.24□□□□□ -0.45
LITAFQ99732 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.24□□□□□ -0.45
LITAFQ99732 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC12.24□□□□□ -0.45
LITAFQ99732 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.24□□□□□ -0.45
LITAFQ99732 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.24□□□□□ -0.45
LITAFQ99732 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.24□□□□□ -0.45
LITAFQ99732 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.24□□□□□ -0.45
LITAFQ99732 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.24□□□□□ -0.45
LITAFQ99732 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms