Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SDHCQ99643 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SDHCQ99643 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SDHCQ99643 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SDHCQ99643 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SDHCQ99643 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SDHCQ99643 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SDHCQ99643 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SDHCQ99643 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SDHCQ99643 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SDHCQ99643 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SDHCQ99643 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.88■□□□□ 0.13
SDHCQ99643 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.88■□□□□ 0.13
SDHCQ99643 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.88■□□□□ 0.13
SDHCQ99643 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SDHCQ99643 KRT18P16-201ENST00000510337 1294 ntBASIC15.88■□□□□ 0.13
SDHCQ99643 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.88■□□□□ 0.13
SDHCQ99643 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.88■□□□□ 0.13
SDHCQ99643 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SDHCQ99643 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.88■□□□□ 0.13
SDHCQ99643 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SDHCQ99643 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.88■□□□□ 0.13
SDHCQ99643 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SDHCQ99643 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.88■□□□□ 0.13
SDHCQ99643 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SDHCQ99643 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
SDHCQ99643 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SDHCQ99643 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.87■□□□□ 0.13
SDHCQ99643 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.87■□□□□ 0.13
SDHCQ99643 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.87■□□□□ 0.13
SDHCQ99643 KRT18P61-201ENST00000585825 1298 ntBASIC15.87■□□□□ 0.13
SDHCQ99643 AL589743.5-201ENST00000616611 1050 ntBASIC15.87■□□□□ 0.13
SDHCQ99643 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.87■□□□□ 0.13
SDHCQ99643 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.87■□□□□ 0.13
SDHCQ99643 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 PCDHB17P-201ENST00000539533 2393 ntBASIC15.87■□□□□ 0.13
SDHCQ99643 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SDHCQ99643 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 AC090340.1-201ENST00000620778 4980 ntBASIC15.87■□□□□ 0.13
SDHCQ99643 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.87■□□□□ 0.13
SDHCQ99643 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SDHCQ99643 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.86■□□□□ 0.13
SDHCQ99643 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SDHCQ99643 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.86■□□□□ 0.13
SDHCQ99643 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SDHCQ99643 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.86■□□□□ 0.13
SDHCQ99643 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
SDHCQ99643 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.86■□□□□ 0.13
SDHCQ99643 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 GPX1P1-201ENST00000388829 606 ntBASIC15.86■□□□□ 0.13
SDHCQ99643 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.86■□□□□ 0.13
SDHCQ99643 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.86■□□□□ 0.13
SDHCQ99643 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.86■□□□□ 0.13
SDHCQ99643 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.86■□□□□ 0.13
SDHCQ99643 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.86■□□□□ 0.13
SDHCQ99643 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.86■□□□□ 0.13
SDHCQ99643 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SDHCQ99643 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SDHCQ99643 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms