Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 AC125437.2-201ENST00000625180 2167 ntBASIC19.71■□□□□ 0.75
YME1L1Q96TA2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 BX842568.4-201ENST00000421222 227 ntBASIC19.71■□□□□ 0.75
YME1L1Q96TA2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YME1L1Q96TA2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 FAM215A-202ENST00000632077 792 ntBASIC19.7■□□□□ 0.74
YME1L1Q96TA2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 TP73-AS1-210ENST00000637775 1455 ntBASIC19.7■□□□□ 0.74
YME1L1Q96TA2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
YME1L1Q96TA2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 RPS2P28-201ENST00000314255 741 ntBASIC19.69■□□□□ 0.74
YME1L1Q96TA2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 RBM17P3-201ENST00000417687 1192 ntBASIC19.69■□□□□ 0.74
YME1L1Q96TA2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 SCARNA2-201ENST00000458748 420 ntBASIC19.69■□□□□ 0.74
YME1L1Q96TA2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 MTDHP3-201ENST00000594186 672 ntBASIC19.69■□□□□ 0.74
YME1L1Q96TA2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YME1L1Q96TA2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YME1L1Q96TA2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
YME1L1Q96TA2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.68■□□□□ 0.74
YME1L1Q96TA2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.68■□□□□ 0.74
YME1L1Q96TA2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
YME1L1Q96TA2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
YME1L1Q96TA2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
YME1L1Q96TA2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
YME1L1Q96TA2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.68■□□□□ 0.74
YME1L1Q96TA2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YME1L1Q96TA2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms