Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.99■□□□□ 0.63
CSPG4P5Q96PW8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 AP000523.1-201ENST00000398242 1049 ntBASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 AC113347.1-201ENST00000413321 391 ntBASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 AC211429.1-201ENST00000415277 523 ntBASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 AC009065.1-201ENST00000564055 1225 ntBASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 AC005363.2-201ENST00000618631 242 ntBASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.98■□□□□ 0.63
CSPG4P5Q96PW8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.97■□□□□ 0.63
CSPG4P5Q96PW8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 TERF1P1-201ENST00000311003 1181 ntBASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 LIN28AP1-201ENST00000429574 405 ntBASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms