Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 AL390955.1-201ENST00000428694 934 ntBASIC19.48■□□□□ 0.71
TRIM11Q96F44 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.48■□□□□ 0.71
TRIM11Q96F44 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM11Q96F44 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM11Q96F44 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
TRIM11Q96F44 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRIM11Q96F44 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRIM11Q96F44 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
TRIM11Q96F44 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM11Q96F44 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 TSPY14P-201ENST00000303979 915 ntBASIC19.47■□□□□ 0.71
TRIM11Q96F44 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM11Q96F44 AC007663.1-201ENST00000438948 1240 ntBASIC19.47■□□□□ 0.71
TRIM11Q96F44 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 MIR3180-4-201ENST00000582223 153 ntBASIC19.47■□□□□ 0.71
TRIM11Q96F44 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM11Q96F44 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM11Q96F44 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM11Q96F44 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM11Q96F44 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM11Q96F44 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM11Q96F44 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 SLC25A6P5-201ENST00000435663 894 ntBASIC19.46■□□□□ 0.71
TRIM11Q96F44 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM11Q96F44 EGLN1P1-201ENST00000531623 762 ntBASIC19.46■□□□□ 0.71
TRIM11Q96F44 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM11Q96F44 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM11Q96F44 AL355075.4-201ENST00000554988 638 ntBASIC19.46■□□□□ 0.71
TRIM11Q96F44 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM11Q96F44 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM11Q96F44 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM11Q96F44 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM11Q96F44 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRIM11Q96F44 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM11Q96F44 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms