Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 PHGDH-209ENST00000641074 1780 ntBASIC18.61■□□□□ 0.57
LRRC39Q96DD0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.61■□□□□ 0.57
LRRC39Q96DD0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 MIR149-201ENST00000384879 89 ntBASIC18.61■□□□□ 0.57
LRRC39Q96DD0 FAM201B-201ENST00000458407 597 ntBASIC18.61■□□□□ 0.57
LRRC39Q96DD0 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 AP001412.1-201ENST00000608405 714 ntBASIC18.61■□□□□ 0.57
LRRC39Q96DD0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC39Q96DD0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 AC036111.1-201ENST00000533973 1582 ntBASIC18.6■□□□□ 0.57
LRRC39Q96DD0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 AC009102.3-201ENST00000623118 1491 ntBASIC18.6■□□□□ 0.57
LRRC39Q96DD0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC39Q96DD0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 SDHAP2-201ENST00000455183 2001 ntBASIC18.59■□□□□ 0.57
LRRC39Q96DD0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.59■□□□□ 0.57
LRRC39Q96DD0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC39Q96DD0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC39Q96DD0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC39Q96DD0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC39Q96DD0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LRRC39Q96DD0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.58■□□□□ 0.57
LRRC39Q96DD0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.58■□□□□ 0.57
LRRC39Q96DD0 LINC00896-202ENST00000609602 2128 ntBASIC18.58■□□□□ 0.57
LRRC39Q96DD0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC39Q96DD0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC39Q96DD0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 KRT18P29-201ENST00000397031 1267 ntBASIC18.58■□□□□ 0.56
LRRC39Q96DD0 RPS2P55-201ENST00000397318 883 ntBASIC18.58■□□□□ 0.56
LRRC39Q96DD0 AC012618.2-201ENST00000428058 849 ntBASIC18.58■□□□□ 0.56
LRRC39Q96DD0 AC107956.1-201ENST00000494359 873 ntBASIC18.58■□□□□ 0.56
LRRC39Q96DD0 AP005242.2-201ENST00000580065 1175 ntBASIC18.58■□□□□ 0.56
LRRC39Q96DD0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC39Q96DD0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms