Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.84■□□□□ 0.29
HPS1Q92902 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.84■□□□□ 0.29
HPS1Q92902 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
HPS1Q92902 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS1Q92902 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS1Q92902 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.84■□□□□ 0.29
HPS1Q92902 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.84■□□□□ 0.29
HPS1Q92902 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HPS1Q92902 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS1Q92902 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS1Q92902 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HPS1Q92902 AC068418.2-201ENST00000577309 3703 ntBASIC16.84■□□□□ 0.29
HPS1Q92902 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS1Q92902 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS1Q92902 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HPS1Q92902 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS1Q92902 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HPS1Q92902 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
HPS1Q92902 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.83■□□□□ 0.28
HPS1Q92902 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.83■□□□□ 0.28
HPS1Q92902 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.83■□□□□ 0.28
HPS1Q92902 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HPS1Q92902 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HPS1Q92902 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.83■□□□□ 0.28
HPS1Q92902 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.83■□□□□ 0.28
HPS1Q92902 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HPS1Q92902 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.83■□□□□ 0.28
HPS1Q92902 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.83■□□□□ 0.28
HPS1Q92902 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.83■□□□□ 0.28
HPS1Q92902 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HPS1Q92902 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.83■□□□□ 0.28
HPS1Q92902 AC233702.5-201ENST00000584107 538 ntBASIC16.83■□□□□ 0.28
HPS1Q92902 AC124016.1-201ENST00000609552 612 ntBASIC16.83■□□□□ 0.28
HPS1Q92902 AC110285.5-201ENST00000611501 352 ntBASIC16.83■□□□□ 0.28
HPS1Q92902 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.83■□□□□ 0.28
HPS1Q92902 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.83■□□□□ 0.28
HPS1Q92902 AC006557.6-201ENST00000623071 864 ntBASIC16.83■□□□□ 0.28
HPS1Q92902 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.83■□□□□ 0.28
HPS1Q92902 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS1Q92902 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HPS1Q92902 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS1Q92902 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
HPS1Q92902 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.82■□□□□ 0.28
HPS1Q92902 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS1Q92902 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HPS1Q92902 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS1Q92902 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
HPS1Q92902 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HPS1Q92902 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HPS1Q92902 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HPS1Q92902 KRT17P2-201ENST00000300992 1314 ntBASIC16.82■□□□□ 0.28
HPS1Q92902 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.82■□□□□ 0.28
HPS1Q92902 RPS2P55-201ENST00000397318 883 ntBASIC16.82■□□□□ 0.28
HPS1Q92902 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HPS1Q92902 AC107956.1-201ENST00000494359 873 ntBASIC16.82■□□□□ 0.28
HPS1Q92902 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.82■□□□□ 0.28
HPS1Q92902 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HPS1Q92902 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HPS1Q92902 AC073912.3-201ENST00000624414 853 ntBASIC16.82■□□□□ 0.28
HPS1Q92902 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 AC135776.1-201ENST00000319817 2481 ntBASIC16.82■□□□□ 0.28
HPS1Q92902 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.82■□□□□ 0.28
HPS1Q92902 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS1Q92902 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms