Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 TEX21P-204ENST00000641479 1693 ntBASIC17.37■□□□□ 0.37
TM9SF4Q92544 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 SPDYE15P-201ENST00000424157 909 ntBASIC17.37■□□□□ 0.37
TM9SF4Q92544 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.37■□□□□ 0.37
TM9SF4Q92544 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 MIR4674-201ENST00000582457 87 ntBASIC17.37■□□□□ 0.37
TM9SF4Q92544 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TM9SF4Q92544 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF4Q92544 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 AL645929.1-201ENST00000420084 975 ntBASIC17.36■□□□□ 0.37
TM9SF4Q92544 ATP5G2P1-201ENST00000433580 426 ntBASIC17.36■□□□□ 0.37
TM9SF4Q92544 TSPY23P-201ENST00000440136 739 ntBASIC17.36■□□□□ 0.37
TM9SF4Q92544 DUSP5P1-201ENST00000441325 1139 ntBASIC17.36■□□□□ 0.37
TM9SF4Q92544 RASA4DP-201ENST00000460726 1199 ntBASIC17.36■□□□□ 0.37
TM9SF4Q92544 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 CLEC4GP1-201ENST00000596555 870 ntBASIC17.36■□□□□ 0.37
TM9SF4Q92544 HYMAI.1-201ENST00000620949 238 ntBASIC17.36■□□□□ 0.37
TM9SF4Q92544 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TM9SF4Q92544 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.36■□□□□ 0.37
TM9SF4Q92544 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF4Q92544 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 AC141586.3-201ENST00000562166 1838 ntBASIC17.35■□□□□ 0.37
TM9SF4Q92544 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms