Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 AC036111.1-201ENST00000533973 1582 ntBASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 AC009947.2-201ENST00000444014 672 ntBASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 CR769767.2-201ENST00000622735 460 ntBASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 AL590326.2-201ENST00000625139 305 ntBASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMARCC2Q8TAQ2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 YBX1P2-201ENST00000489612 999 ntBASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 AC140113.3-201ENST00000605663 199 ntBASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SMARCC2Q8TAQ2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 AL023973.1-201ENST00000624619 620 ntBASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCC2Q8TAQ2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC2Q8TAQ2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms