Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 AC113347.1-201ENST00000413321 391 ntBASIC19.73■□□□□ 0.75
LMO3Q8TAP4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.73■□□□□ 0.75
LMO3Q8TAP4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 AC018470.1-201ENST00000624790 3129 ntBASIC19.72■□□□□ 0.75
LMO3Q8TAP4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 AC138028.4-201ENST00000564984 1845 ntBASIC19.72■□□□□ 0.75
LMO3Q8TAP4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 AC009065.1-201ENST00000564055 1225 ntBASIC19.72■□□□□ 0.75
LMO3Q8TAP4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 AL023973.1-201ENST00000624619 620 ntBASIC19.72■□□□□ 0.75
LMO3Q8TAP4 AL157888.1-201ENST00000631930 593 ntBASIC19.72■□□□□ 0.75
LMO3Q8TAP4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 AC008764.6-201ENST00000595909 2069 ntBASIC19.72■□□□□ 0.75
LMO3Q8TAP4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.72■□□□□ 0.75
LMO3Q8TAP4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 AC068880.1-201ENST00000507289 2297 ntBASIC19.72■□□□□ 0.75
LMO3Q8TAP4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
LMO3Q8TAP4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 AL441883.1-201ENST00000566170 1045 ntBASIC19.71■□□□□ 0.75
LMO3Q8TAP4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 AC005363.2-201ENST00000618631 242 ntBASIC19.71■□□□□ 0.75
LMO3Q8TAP4 AC093010.1-201ENST00000473625 1624 ntBASIC19.71■□□□□ 0.75
LMO3Q8TAP4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMO3Q8TAP4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
LMO3Q8TAP4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms