Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 TSPY12P-201ENST00000421279 868 ntBASIC22.63■■□□□ 1.21
RTL9Q8NET4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC22.63■■□□□ 1.21
RTL9Q8NET4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTL9Q8NET4 BNIP3P18-201ENST00000593976 575 ntBASIC22.63■■□□□ 1.21
RTL9Q8NET4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.62■■□□□ 1.21
RTL9Q8NET4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.62■■□□□ 1.21
RTL9Q8NET4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.62■■□□□ 1.21
RTL9Q8NET4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC22.62■■□□□ 1.21
RTL9Q8NET4 AKR1C7P-201ENST00000305623 895 ntBASIC22.62■■□□□ 1.21
RTL9Q8NET4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
RTL9Q8NET4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.62■■□□□ 1.21
RTL9Q8NET4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.62■■□□□ 1.21
RTL9Q8NET4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 AC006538.3-201ENST00000612495 578 ntBASIC22.62■■□□□ 1.21
RTL9Q8NET4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RTL9Q8NET4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTL9Q8NET4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 AC011840.4-201ENST00000578471 627 ntBASIC22.61■■□□□ 1.21
RTL9Q8NET4 AL671883.3-201ENST00000603274 991 ntBASIC22.61■■□□□ 1.21
RTL9Q8NET4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.61■■□□□ 1.21
RTL9Q8NET4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTL9Q8NET4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTL9Q8NET4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTL9Q8NET4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTL9Q8NET4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTL9Q8NET4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTL9Q8NET4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTL9Q8NET4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTL9Q8NET4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTL9Q8NET4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 AL121912.1-201ENST00000603683 238 ntBASIC22.6■■□□□ 1.21
RTL9Q8NET4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTL9Q8NET4 AL499627.1-201ENST00000569373 2188 ntBASIC22.6■■□□□ 1.21
RTL9Q8NET4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.6■■□□□ 1.21
RTL9Q8NET4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC22.59■■□□□ 1.21
RTL9Q8NET4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC22.59■■□□□ 1.21
RTL9Q8NET4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC22.59■■□□□ 1.21
RTL9Q8NET4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC22.59■■□□□ 1.21
RTL9Q8NET4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC22.59■■□□□ 1.21
RTL9Q8NET4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC22.59■■□□□ 1.21
RTL9Q8NET4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms