Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PAF1Q8N7H5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.91■□□□□ 0.62
PAF1Q8N7H5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.91■□□□□ 0.62
PAF1Q8N7H5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.91■□□□□ 0.62
PAF1Q8N7H5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 FAM210CP-201ENST00000445714 574 ntBASIC18.91■□□□□ 0.62
PAF1Q8N7H5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 CR769767.2-201ENST00000622735 460 ntBASIC18.91■□□□□ 0.62
PAF1Q8N7H5 AC141257.4-201ENST00000634557 245 ntBASIC18.91■□□□□ 0.62
PAF1Q8N7H5 AC136944.6-201ENST00000634818 245 ntBASIC18.91■□□□□ 0.62
PAF1Q8N7H5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 AC008556.1-201ENST00000610908 2040 ntBASIC18.91■□□□□ 0.62
PAF1Q8N7H5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.91■□□□□ 0.62
PAF1Q8N7H5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 RCN1P1-201ENST00000400413 996 ntBASIC18.9■□□□□ 0.62
PAF1Q8N7H5 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAF1Q8N7H5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PAF1Q8N7H5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
PAF1Q8N7H5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PAF1Q8N7H5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 BX664615.1-201ENST00000443558 458 ntBASIC18.89■□□□□ 0.61
PAF1Q8N7H5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 KRT8P32-201ENST00000512863 1461 ntBASIC18.89■□□□□ 0.61
PAF1Q8N7H5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAF1Q8N7H5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PAF1Q8N7H5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PAF1Q8N7H5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PAF1Q8N7H5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PAF1Q8N7H5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PAF1Q8N7H5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms