Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NME8Q8N427 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NME8Q8N427 MIR149-201ENST00000384879 89 ntBASIC20.24■□□□□ 0.83
NME8Q8N427 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.24■□□□□ 0.83
NME8Q8N427 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.24■□□□□ 0.83
NME8Q8N427 AC104819.1-201ENST00000504587 486 ntBASIC20.24■□□□□ 0.83
NME8Q8N427 UNC93B7-201ENST00000509439 705 ntBASIC20.24■□□□□ 0.83
NME8Q8N427 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.24■□□□□ 0.83
NME8Q8N427 AC091304.2-201ENST00000564639 760 ntBASIC20.24■□□□□ 0.83
NME8Q8N427 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.24■□□□□ 0.83
NME8Q8N427 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.24■□□□□ 0.83
NME8Q8N427 AC008687.5-201ENST00000593746 558 ntBASIC20.24■□□□□ 0.83
NME8Q8N427 Z69720.1-201ENST00000601483 472 ntBASIC20.24■□□□□ 0.83
NME8Q8N427 AC124864.1-201ENST00000623408 392 ntBASIC20.24■□□□□ 0.83
NME8Q8N427 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.24■□□□□ 0.83
NME8Q8N427 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NME8Q8N427 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 AC233702.3-201ENST00000578656 1387 ntBASIC20.23■□□□□ 0.83
NME8Q8N427 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NME8Q8N427 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NME8Q8N427 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.23■□□□□ 0.83
NME8Q8N427 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.23■□□□□ 0.83
NME8Q8N427 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.23■□□□□ 0.83
NME8Q8N427 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.23■□□□□ 0.83
NME8Q8N427 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.23■□□□□ 0.83
NME8Q8N427 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NME8Q8N427 AC005332.7-201ENST00000614046 2005 ntBASIC20.23■□□□□ 0.83
NME8Q8N427 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.23■□□□□ 0.83
NME8Q8N427 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.23■□□□□ 0.83
NME8Q8N427 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NME8Q8N427 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NME8Q8N427 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.22■□□□□ 0.83
NME8Q8N427 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NME8Q8N427 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.22■□□□□ 0.83
NME8Q8N427 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NME8Q8N427 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.22■□□□□ 0.83
NME8Q8N427 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NME8Q8N427 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 AL845331.1-201ENST00000424978 1190 ntBASIC20.22■□□□□ 0.83
NME8Q8N427 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.22■□□□□ 0.83
NME8Q8N427 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.22■□□□□ 0.83
NME8Q8N427 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 LINC01711-201ENST00000598340 967 ntBASIC20.22■□□□□ 0.83
NME8Q8N427 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 AL592071.1-201ENST00000611956 408 ntBASIC20.22■□□□□ 0.83
NME8Q8N427 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.22■□□□□ 0.83
NME8Q8N427 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.22■□□□□ 0.83
NME8Q8N427 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.22■□□□□ 0.83
NME8Q8N427 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NME8Q8N427 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NME8Q8N427 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NME8Q8N427 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
NME8Q8N427 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms