Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC064836.3-201ENST00000607928 673 ntBASIC26.08■■□□□ 1.77
UBR1Q8IWV7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
UBR1Q8IWV7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.08■■□□□ 1.77
UBR1Q8IWV7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
UBR1Q8IWV7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
UBR1Q8IWV7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
UBR1Q8IWV7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
UBR1Q8IWV7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
UBR1Q8IWV7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
UBR1Q8IWV7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC26.08■■□□□ 1.76
UBR1Q8IWV7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC26.08■■□□□ 1.76
UBR1Q8IWV7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC26.08■■□□□ 1.76
UBR1Q8IWV7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC26.08■■□□□ 1.76
UBR1Q8IWV7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
UBR1Q8IWV7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
UBR1Q8IWV7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC26.07■■□□□ 1.76
UBR1Q8IWV7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
UBR1Q8IWV7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
UBR1Q8IWV7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
UBR1Q8IWV7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC26.07■■□□□ 1.76
UBR1Q8IWV7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC26.07■■□□□ 1.76
UBR1Q8IWV7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
UBR1Q8IWV7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
UBR1Q8IWV7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
UBR1Q8IWV7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 AC002310.6-201ENST00000624451 1377 ntBASIC26.06■■□□□ 1.76
UBR1Q8IWV7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 MCCD1P2-201ENST00000423228 335 ntBASIC26.06■■□□□ 1.76
UBR1Q8IWV7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 MTDHP5-201ENST00000598980 586 ntBASIC26.06■■□□□ 1.76
UBR1Q8IWV7 AC083906.6-201ENST00000641366 219 ntBASIC26.06■■□□□ 1.76
UBR1Q8IWV7 AC079781.4-201ENST00000641908 219 ntBASIC26.06■■□□□ 1.76
UBR1Q8IWV7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 LINC01006-201ENST00000333319 2292 ntBASIC26.06■■□□□ 1.76
UBR1Q8IWV7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 SDHAP2-201ENST00000455183 2001 ntBASIC26.06■■□□□ 1.76
UBR1Q8IWV7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
UBR1Q8IWV7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 AC108751.1-201ENST00000490852 363 ntBASIC26.05■■□□□ 1.76
UBR1Q8IWV7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 MIR3197-201ENST00000582241 73 ntBASIC26.05■■□□□ 1.76
UBR1Q8IWV7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC26.05■■□□□ 1.76
UBR1Q8IWV7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
UBR1Q8IWV7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
UBR1Q8IWV7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
UBR1Q8IWV7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms