Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 NOC2LP2-201ENST00000407594 1944 ntBASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 AC018470.1-201ENST00000624790 3129 ntBASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 AL163051.1-201ENST00000569214 1512 ntBASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL3Q8IVW4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 AC009102.3-201ENST00000623118 1491 ntBASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 MIR149-201ENST00000384879 89 ntBASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 AC007663.1-201ENST00000438948 1240 ntBASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDKL3Q8IVW4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 AC010653.2-201ENST00000623505 997 ntBASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL3Q8IVW4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL3Q8IVW4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL3Q8IVW4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.9■□□□□ 0.62
CDKL3Q8IVW4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.9■□□□□ 0.62
CDKL3Q8IVW4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL3Q8IVW4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms