Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 RCN1P2-201ENST00000398357 915 ntBASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 AC068472.1-201ENST00000474589 881 ntBASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 AC093909.1-201ENST00000504731 1122 ntBASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.7■□□□□ 0.74
NPAS4Q8IUM7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 AC112777.1-201ENST00000540175 1423 ntBASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 TP73-AS1-210ENST00000637775 1455 ntBASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 AC148477.8-201ENST00000624298 468 ntBASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPAS4Q8IUM7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 MIR574-201ENST00000385209 96 ntBASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 AC018712.1-201ENST00000455767 687 ntBASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 AL355877.3-201ENST00000622820 899 ntBASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.68■□□□□ 0.74
NPAS4Q8IUM7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 MYLKP1-201ENST00000509077 1580 ntBASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 RBM17P3-201ENST00000417687 1192 ntBASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 SLC25A1P1-201ENST00000528351 927 ntBASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 AC009533.2-201ENST00000543664 586 ntBASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms