Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 AF186192.3-201ENST00000583427 947 ntBASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 AC068587.9-201ENST00000641814 219 ntBASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 MIR4651-201ENST00000582622 73 ntBASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 ABBA01031674.1-201ENST00000635145 728 ntBASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 NFYC-AS1-201ENST00000606277 1687 ntBASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 BICD1-207ENST00000551848 1962 ntBASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.87□□□□□ -0.51
MRPL55Q7Z7F7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 AC112777.1-201ENST00000540175 1423 ntBASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 MTMR9LP-203ENST00000426597 1545 ntBASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 AC007613.1-201ENST00000572811 2597 ntBASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 CKBP1-201ENST00000565489 1086 ntBASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms