Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 AC139713.2-201ENST00000641328 2723 ntBASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 REXO1L9P-201ENST00000604264 2108 ntBASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 AC097493.4-201ENST00000641197 219 ntBASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 AC138028.4-201ENST00000564984 1845 ntBASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.5■□□□□ 0.55
CDHR3Q6ZTQ4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 AC091390.4-202ENST00000476426 537 ntBASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 CYP2D8P-201ENST00000433633 1490 ntBASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.49■□□□□ 0.55
CDHR3Q6ZTQ4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 AC097488.1-201ENST00000507834 756 ntBASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 AP000692.2-201ENST00000608391 879 ntBASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 MYC-208ENST00000641036 567 ntBASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.48■□□□□ 0.55
CDHR3Q6ZTQ4 GNAS-203ENST00000306120 1878 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms