Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGSNQ5TDP6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGSNQ5TDP6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LGSNQ5TDP6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.6■□□□□ 0.57
LGSNQ5TDP6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.6■□□□□ 0.57
LGSNQ5TDP6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGSNQ5TDP6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LGSNQ5TDP6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.6■□□□□ 0.57
LGSNQ5TDP6 FLJ13224-201ENST00000313737 1514 ntBASIC18.59■□□□□ 0.57
LGSNQ5TDP6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 ID1-201ENST00000376105 1233 ntBASIC18.59■□□□□ 0.57
LGSNQ5TDP6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 NIFKP9-201ENST00000419265 221 ntBASIC18.59■□□□□ 0.57
LGSNQ5TDP6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGSNQ5TDP6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 REXO1L9P-201ENST00000604264 2108 ntBASIC18.58■□□□□ 0.57
LGSNQ5TDP6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.58■□□□□ 0.57
LGSNQ5TDP6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 AP000593.1-201ENST00000393668 712 ntBASIC18.58■□□□□ 0.56
LGSNQ5TDP6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 AC091390.4-202ENST00000476426 537 ntBASIC18.58■□□□□ 0.56
LGSNQ5TDP6 AC026366.1-201ENST00000488803 879 ntBASIC18.58■□□□□ 0.56
LGSNQ5TDP6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 AC104771.1-201ENST00000603335 964 ntBASIC18.58■□□□□ 0.56
LGSNQ5TDP6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGSNQ5TDP6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 AL109659.2-201ENST00000606809 1674 ntBASIC18.57■□□□□ 0.56
LGSNQ5TDP6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.57■□□□□ 0.56
LGSNQ5TDP6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 AP002982.1-201ENST00000492365 877 ntBASIC18.57■□□□□ 0.56
LGSNQ5TDP6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGSNQ5TDP6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms