Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 AC083906.6-201ENST00000641366 219 ntBASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 AL162741.1-201ENST00000565563 1558 ntBASIC16■□□□□ 0.15
ATPAF1Q5TC12 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 AP003071.4-201ENST00000562276 1284 ntBASIC16■□□□□ 0.15
ATPAF1Q5TC12 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 AP000692.2-201ENST00000608391 879 ntBASIC16■□□□□ 0.15
ATPAF1Q5TC12 DGCR10-201ENST00000609839 495 ntBASIC16■□□□□ 0.15
ATPAF1Q5TC12 AC011298.2-201ENST00000617989 482 ntBASIC16■□□□□ 0.15
ATPAF1Q5TC12 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF1Q5TC12 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16■□□□□ 0.15
ATPAF1Q5TC12 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 SNORA78-201ENST00000459373 127 ntBASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 REXO1L10P-201ENST00000615707 1290 ntBASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 REXO1L12P-201ENST00000622156 912 ntBASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF1Q5TC12 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms