Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 AC008556.1-201ENST00000610908 2040 ntBASIC12.2□□□□□ -0.46
SYCNQ0VAF6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SYCNQ0VAF6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 AP000593.1-201ENST00000393668 712 ntBASIC12.19□□□□□ -0.46
SYCNQ0VAF6 AL023284.2-201ENST00000405850 579 ntBASIC12.19□□□□□ -0.46
SYCNQ0VAF6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 AP005242.2-201ENST00000580065 1175 ntBASIC12.19□□□□□ -0.46
SYCNQ0VAF6 AC008622.2-201ENST00000617006 1229 ntBASIC12.19□□□□□ -0.46
SYCNQ0VAF6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 AC135050.7-201ENST00000624508 2218 ntBASIC12.19□□□□□ -0.46
SYCNQ0VAF6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 AL499627.1-201ENST00000569373 2188 ntBASIC12.19□□□□□ -0.46
SYCNQ0VAF6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SYCNQ0VAF6 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.19□□□□□ -0.46
SYCNQ0VAF6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 KRT17P2-201ENST00000300992 1314 ntBASIC12.18□□□□□ -0.46
SYCNQ0VAF6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 MIR564-202ENST00000385049 94 ntBASIC12.18□□□□□ -0.46
SYCNQ0VAF6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SYCNQ0VAF6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms