Protein–RNA interactions for Protein: Q03468

ERCC6, DNA excision repair protein ERCC-6, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6Q03468 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC31.29■■■□□ 2.6
ERCC6Q03468 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC31.29■■■□□ 2.6
ERCC6Q03468 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC31.29■■■□□ 2.6
ERCC6Q03468 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC31.29■■■□□ 2.6
ERCC6Q03468 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 AL359881.2-201ENST00000602973 570 ntBASIC31.29■■■□□ 2.6
ERCC6Q03468 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC31.29■■■□□ 2.6
ERCC6Q03468 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC31.29■■■□□ 2.6
ERCC6Q03468 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC31.29■■■□□ 2.6
ERCC6Q03468 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ERCC6Q03468 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
ERCC6Q03468 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ERCC6Q03468 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ERCC6Q03468 NMU-203ENST00000507338 658 ntTSL 3 BASIC31.28■■■□□ 2.6
ERCC6Q03468 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ERCC6Q03468 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC31.28■■■□□ 2.6
ERCC6Q03468 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
ERCC6Q03468 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC31.28■■■□□ 2.6
ERCC6Q03468 AC008687.5-201ENST00000593746 558 ntBASIC31.28■■■□□ 2.6
ERCC6Q03468 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ERCC6Q03468 AC073592.4-201ENST00000623827 446 ntBASIC31.28■■■□□ 2.6
ERCC6Q03468 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC31.28■■■□□ 2.6
ERCC6Q03468 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC31.28■■■□□ 2.6
ERCC6Q03468 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
ERCC6Q03468 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ERCC6Q03468 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC31.28■■■□□ 2.6
ERCC6Q03468 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ERCC6Q03468 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ERCC6Q03468 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ERCC6Q03468 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC31.27■■■□□ 2.6
ERCC6Q03468 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC31.27■■■□□ 2.6
ERCC6Q03468 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC31.27■■■□□ 2.6
ERCC6Q03468 OARD1-208ENST00000469104 704 ntTSL 2 BASIC31.27■■■□□ 2.6
ERCC6Q03468 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ERCC6Q03468 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC31.27■■■□□ 2.6
ERCC6Q03468 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC31.27■■■□□ 2.6
ERCC6Q03468 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
ERCC6Q03468 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC31.27■■■□□ 2.6
ERCC6Q03468 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC31.27■■■□□ 2.6
ERCC6Q03468 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC31.27■■■□□ 2.6
ERCC6Q03468 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
ERCC6Q03468 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ERCC6Q03468 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC31.27■■■□□ 2.6
ERCC6Q03468 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
ERCC6Q03468 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC31.27■■■□□ 2.6
ERCC6Q03468 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ERCC6Q03468 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
ERCC6Q03468 NAA60-208ENST00000570819 833 ntTSL 2 BASIC31.27■■■□□ 2.6
ERCC6Q03468 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
ERCC6Q03468 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ERCC6Q03468 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC31.26■■■□□ 2.6
ERCC6Q03468 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
ERCC6Q03468 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
ERCC6Q03468 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ERCC6Q03468 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
ERCC6Q03468 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ERCC6Q03468 IGLL3P-201ENST00000412472 434 ntBASIC31.26■■■□□ 2.59
ERCC6Q03468 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC31.26■■■□□ 2.59
ERCC6Q03468 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC31.26■■■□□ 2.59
ERCC6Q03468 AL606495.2-201ENST00000605867 535 ntBASIC31.26■■■□□ 2.59
ERCC6Q03468 LINC00628-201ENST00000628516 1289 ntBASIC31.26■■■□□ 2.59
ERCC6Q03468 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC31.25■■■□□ 2.59
ERCC6Q03468 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ERCC6Q03468 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ERCC6Q03468 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC31.25■■■□□ 2.59
ERCC6Q03468 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC31.25■■■□□ 2.59
ERCC6Q03468 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC31.25■■■□□ 2.59
ERCC6Q03468 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
ERCC6Q03468 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
ERCC6Q03468 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC31.25■■■□□ 2.59
ERCC6Q03468 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC31.25■■■□□ 2.59
ERCC6Q03468 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC31.25■■■□□ 2.59
ERCC6Q03468 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC31.25■■■□□ 2.59
ERCC6Q03468 RN7SL204P-201ENST00000582831 262 ntBASIC31.25■■■□□ 2.59
ERCC6Q03468 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ERCC6Q03468 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ERCC6Q03468 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ERCC6Q03468 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC31.24■■■□□ 2.59
ERCC6Q03468 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
ERCC6Q03468 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ERCC6Q03468 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ERCC6Q03468 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC31.24■■■□□ 2.59
ERCC6Q03468 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ERCC6Q03468 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC31.24■■■□□ 2.59
ERCC6Q03468 NOP2-220ENST00000545915 630 ntTSL 2 BASIC31.24■■■□□ 2.59
ERCC6Q03468 AC010507.1-201ENST00000633895 436 ntBASIC31.24■■■□□ 2.59
ERCC6Q03468 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
ERCC6Q03468 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC31.24■■■□□ 2.59
ERCC6Q03468 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
ERCC6Q03468 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ERCC6Q03468 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms