Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RBM17P3-201ENST00000417687 1192 ntBASIC20.91■□□□□ 0.94
CCNA1P78396 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.91■□□□□ 0.94
CCNA1P78396 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNA1P78396 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNA1P78396 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNA1P78396 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.91■□□□□ 0.94
CCNA1P78396 RNPS1P1-201ENST00000507437 918 ntBASIC20.91■□□□□ 0.94
CCNA1P78396 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.91■□□□□ 0.94
CCNA1P78396 AC073648.2-201ENST00000510116 352 ntBASIC20.91■□□□□ 0.94
CCNA1P78396 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.91■□□□□ 0.94
CCNA1P78396 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.91■□□□□ 0.94
CCNA1P78396 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNA1P78396 AL355877.3-201ENST00000622820 899 ntBASIC20.91■□□□□ 0.94
CCNA1P78396 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNA1P78396 AL158211.5-201ENST00000623583 2518 ntBASIC20.91■□□□□ 0.94
CCNA1P78396 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNA1P78396 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNA1P78396 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCNA1P78396 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNA1P78396 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
CCNA1P78396 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNA1P78396 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
CCNA1P78396 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.9■□□□□ 0.94
CCNA1P78396 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNA1P78396 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNA1P78396 TP73-AS1-210ENST00000637775 1455 ntBASIC20.9■□□□□ 0.94
CCNA1P78396 AC112777.1-201ENST00000540175 1423 ntBASIC20.9■□□□□ 0.94
CCNA1P78396 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCNA1P78396 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNA1P78396 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNA1P78396 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNA1P78396 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCNA1P78396 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.9■□□□□ 0.94
CCNA1P78396 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.9■□□□□ 0.94
CCNA1P78396 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.9■□□□□ 0.94
CCNA1P78396 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.9■□□□□ 0.94
CCNA1P78396 AC009533.2-201ENST00000543664 586 ntBASIC20.9■□□□□ 0.94
CCNA1P78396 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNA1P78396 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.9■□□□□ 0.94
CCNA1P78396 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNA1P78396 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCNA1P78396 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.9■□□□□ 0.94
CCNA1P78396 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNA1P78396 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CCNA1P78396 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.89■□□□□ 0.94
CCNA1P78396 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.89■□□□□ 0.94
CCNA1P78396 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CCNA1P78396 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CCNA1P78396 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCNA1P78396 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNA1P78396 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCNA1P78396 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.89■□□□□ 0.93
CCNA1P78396 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.89■□□□□ 0.93
CCNA1P78396 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.89■□□□□ 0.93
CCNA1P78396 SCARNA2-201ENST00000458748 420 ntBASIC20.89■□□□□ 0.93
CCNA1P78396 AC068472.1-201ENST00000474589 881 ntBASIC20.89■□□□□ 0.93
CCNA1P78396 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.89■□□□□ 0.93
CCNA1P78396 SLC25A1P1-201ENST00000528351 927 ntBASIC20.89■□□□□ 0.93
CCNA1P78396 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.89■□□□□ 0.93
CCNA1P78396 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.89■□□□□ 0.93
CCNA1P78396 AC148477.8-201ENST00000624298 468 ntBASIC20.89■□□□□ 0.93
CCNA1P78396 AC083906.6-201ENST00000641366 219 ntBASIC20.89■□□□□ 0.93
CCNA1P78396 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNA1P78396 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNA1P78396 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCNA1P78396 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNA1P78396 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCNA1P78396 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCNA1P78396 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCNA1P78396 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.89■□□□□ 0.93
CCNA1P78396 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCNA1P78396 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.88■□□□□ 0.93
CCNA1P78396 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCNA1P78396 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.88■□□□□ 0.93
CCNA1P78396 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.88■□□□□ 0.93
CCNA1P78396 AC018712.1-201ENST00000455767 687 ntBASIC20.88■□□□□ 0.93
CCNA1P78396 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.88■□□□□ 0.93
CCNA1P78396 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.88■□□□□ 0.93
CCNA1P78396 AC005336.2-201ENST00000593183 939 ntBASIC20.88■□□□□ 0.93
CCNA1P78396 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.88■□□□□ 0.93
CCNA1P78396 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CCNA1P78396 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.88■□□□□ 0.93
CCNA1P78396 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.88■□□□□ 0.93
CCNA1P78396 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNA1P78396 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms