Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MIR662-201ENST00000384847 95 ntBASIC18.51■□□□□ 0.55
AP1S1P61966 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.51■□□□□ 0.55
AP1S1P61966 SPDYE13P-201ENST00000445314 798 ntBASIC18.51■□□□□ 0.55
AP1S1P61966 VENTXP5-201ENST00000523979 775 ntBASIC18.51■□□□□ 0.55
AP1S1P61966 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.51■□□□□ 0.55
AP1S1P61966 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
AP1S1P61966 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.51■□□□□ 0.55
AP1S1P61966 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.51■□□□□ 0.55
AP1S1P61966 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 KRT89P-201ENST00000620027 1478 ntBASIC18.51■□□□□ 0.55
AP1S1P61966 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S1P61966 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.51■□□□□ 0.55
AP1S1P61966 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
AP1S1P61966 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.5■□□□□ 0.55
AP1S1P61966 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.5■□□□□ 0.55
AP1S1P61966 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.5■□□□□ 0.55
AP1S1P61966 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.5■□□□□ 0.55
AP1S1P61966 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.5■□□□□ 0.55
AP1S1P61966 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.5■□□□□ 0.55
AP1S1P61966 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.5■□□□□ 0.55
AP1S1P61966 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.5■□□□□ 0.55
AP1S1P61966 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.5■□□□□ 0.55
AP1S1P61966 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.5■□□□□ 0.55
AP1S1P61966 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
AP1S1P61966 AC024563.2-201ENST00000603282 481 ntBASIC18.5■□□□□ 0.55
AP1S1P61966 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
AP1S1P61966 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.5■□□□□ 0.55
AP1S1P61966 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 GMCL1P1-201ENST00000463439 1581 ntBASIC18.5■□□□□ 0.55
AP1S1P61966 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S1P61966 AL024508.2-201ENST00000607749 1894 ntBASIC18.5■□□□□ 0.55
AP1S1P61966 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S1P61966 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S1P61966 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
AP1S1P61966 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.49■□□□□ 0.55
AP1S1P61966 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S1P61966 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S1P61966 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S1P61966 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S1P61966 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S1P61966 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S1P61966 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S1P61966 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.49■□□□□ 0.55
AP1S1P61966 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.49■□□□□ 0.55
AP1S1P61966 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
AP1S1P61966 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S1P61966 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
AP1S1P61966 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S1P61966 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
AP1S1P61966 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.48■□□□□ 0.55
AP1S1P61966 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
AP1S1P61966 AC099343.3-201ENST00000605834 2503 ntBASIC18.48■□□□□ 0.55
AP1S1P61966 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.48■□□□□ 0.55
AP1S1P61966 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
AP1S1P61966 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.48■□□□□ 0.55
AP1S1P61966 AL645929.1-201ENST00000420084 975 ntBASIC18.48■□□□□ 0.55
AP1S1P61966 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms