Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCR4P61073 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCR4P61073 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCR4P61073 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CXCR4P61073 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCR4P61073 AP001094.4-201ENST00000579008 2176 ntBASIC16.79■□□□□ 0.28
CXCR4P61073 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CXCR4P61073 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CXCR4P61073 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CXCR4P61073 AL096828.2-201ENST00000567259 1965 ntBASIC16.79■□□□□ 0.28
CXCR4P61073 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 NKILA-202ENST00000614771 2598 ntBASIC16.79■□□□□ 0.28
CXCR4P61073 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CXCR4P61073 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CXCR4P61073 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CXCR4P61073 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.79■□□□□ 0.28
CXCR4P61073 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.79■□□□□ 0.28
CXCR4P61073 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.79■□□□□ 0.28
CXCR4P61073 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.79■□□□□ 0.28
CXCR4P61073 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CXCR4P61073 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXCR4P61073 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CXCR4P61073 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.78■□□□□ 0.28
CXCR4P61073 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.78■□□□□ 0.28
CXCR4P61073 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.78■□□□□ 0.28
CXCR4P61073 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.78■□□□□ 0.28
CXCR4P61073 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.78■□□□□ 0.28
CXCR4P61073 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.78■□□□□ 0.28
CXCR4P61073 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.78■□□□□ 0.28
CXCR4P61073 PRKY-204ENST00000533551 1019 ntBASIC16.78■□□□□ 0.28
CXCR4P61073 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.78■□□□□ 0.28
CXCR4P61073 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.78■□□□□ 0.28
CXCR4P61073 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CXCR4P61073 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.78■□□□□ 0.28
CXCR4P61073 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 AC022211.2-201ENST00000585075 2527 ntBASIC16.78■□□□□ 0.28
CXCR4P61073 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CXCR4P61073 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.78■□□□□ 0.28
CXCR4P61073 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CXCR4P61073 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CXCR4P61073 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.78■□□□□ 0.28
CXCR4P61073 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXCR4P61073 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXCR4P61073 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXCR4P61073 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXCR4P61073 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CXCR4P61073 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXCR4P61073 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXCR4P61073 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.77■□□□□ 0.28
CXCR4P61073 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.77■□□□□ 0.28
CXCR4P61073 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXCR4P61073 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CXCR4P61073 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CXCR4P61073 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXCR4P61073 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.77■□□□□ 0.28
CXCR4P61073 KRT18P41-201ENST00000518924 1277 ntBASIC16.77■□□□□ 0.28
CXCR4P61073 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.77■□□□□ 0.28
CXCR4P61073 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.77■□□□□ 0.28
CXCR4P61073 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.77■□□□□ 0.28
CXCR4P61073 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CXCR4P61073 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCR4P61073 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CXCR4P61073 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CXCR4P61073 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CXCR4P61073 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CXCR4P61073 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CXCR4P61073 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXCR4P61073 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXCR4P61073 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.77■□□□□ 0.27
CXCR4P61073 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms