Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CKS1BP61024 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CKS1BP61024 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.9□□□□□ -0.34
CKS1BP61024 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.9□□□□□ -0.34
CKS1BP61024 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CKS1BP61024 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 AC010980.2-201ENST00000587099 1412 ntBASIC12.9□□□□□ -0.34
CKS1BP61024 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.9□□□□□ -0.34
CKS1BP61024 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.9□□□□□ -0.34
CKS1BP61024 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
CKS1BP61024 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CKS1BP61024 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.9□□□□□ -0.34
CKS1BP61024 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.9□□□□□ -0.34
CKS1BP61024 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.9□□□□□ -0.34
CKS1BP61024 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.9□□□□□ -0.34
CKS1BP61024 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CKS1BP61024 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.9□□□□□ -0.34
CKS1BP61024 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.9□□□□□ -0.34
CKS1BP61024 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.9□□□□□ -0.34
CKS1BP61024 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS1BP61024 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CKS1BP61024 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
CKS1BP61024 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CKS1BP61024 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS1BP61024 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CKS1BP61024 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.89□□□□□ -0.35
CKS1BP61024 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.89□□□□□ -0.35
CKS1BP61024 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS1BP61024 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 ZNF815P-204ENST00000434898 1737 ntBASIC12.89□□□□□ -0.35
CKS1BP61024 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS1BP61024 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 BID-214ENST00000617586 542 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS1BP61024 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC12.89□□□□□ -0.35
CKS1BP61024 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CKS1BP61024 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS1BP61024 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CKS1BP61024 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS1BP61024 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CKS1BP61024 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.89□□□□□ -0.35
CKS1BP61024 TEX21P-204ENST00000641479 1693 ntBASIC12.89□□□□□ -0.35
CKS1BP61024 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS1BP61024 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS1BP61024 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS1BP61024 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS1BP61024 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CKS1BP61024 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS1BP61024 AC005052.1-201ENST00000625181 2492 ntBASIC12.88□□□□□ -0.35
CKS1BP61024 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS1BP61024 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CKS1BP61024 CROCCP3-202ENST00000420820 1947 ntBASIC12.88□□□□□ -0.35
CKS1BP61024 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS1BP61024 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CKS1BP61024 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS1BP61024 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.88□□□□□ -0.35
CKS1BP61024 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS1BP61024 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.88□□□□□ -0.35
CKS1BP61024 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS1BP61024 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms