Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB38P57729 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB38P57729 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.3■□□□□ 0.36
RAB38P57729 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB38P57729 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB38P57729 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB38P57729 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAB38P57729 LINC01311-201ENST00000565162 1445 ntBASIC17.3■□□□□ 0.36
RAB38P57729 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB38P57729 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RAB38P57729 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB38P57729 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAB38P57729 AL020996.1-203ENST00000536896 2307 ntBASIC17.29■□□□□ 0.36
RAB38P57729 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
RAB38P57729 HBZP1-201ENST00000354915 429 ntBASIC17.29■□□□□ 0.36
RAB38P57729 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB38P57729 HLA-F-220ENST00000434407 884 ntBASIC17.29■□□□□ 0.36
RAB38P57729 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB38P57729 HYMAI.1-201ENST00000620949 238 ntBASIC17.29■□□□□ 0.36
RAB38P57729 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB38P57729 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB38P57729 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB38P57729 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RAB38P57729 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB38P57729 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB38P57729 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB38P57729 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 AC099343.3-201ENST00000605834 2503 ntBASIC17.28■□□□□ 0.36
RAB38P57729 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB38P57729 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB38P57729 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB38P57729 GMCL1P1-201ENST00000463439 1581 ntBASIC17.28■□□□□ 0.36
RAB38P57729 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB38P57729 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB38P57729 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB38P57729 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 MIR1224-201ENST00000408193 85 ntBASIC17.28■□□□□ 0.36
RAB38P57729 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB38P57729 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB38P57729 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.28■□□□□ 0.36
RAB38P57729 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB38P57729 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB38P57729 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB38P57729 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB38P57729 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB38P57729 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
RAB38P57729 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB38P57729 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAB38P57729 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB38P57729 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB38P57729 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RAB38P57729 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB38P57729 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB38P57729 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB38P57729 AC010331.1-201ENST00000611423 582 ntBASIC17.27■□□□□ 0.36
RAB38P57729 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms