Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 AC008556.1-201ENST00000610908 2040 ntBASIC16.88■□□□□ 0.29
CLDN20P56880 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN20P56880 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN20P56880 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CLDN20P56880 AC009947.2-201ENST00000444014 672 ntBASIC16.88■□□□□ 0.29
CLDN20P56880 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN20P56880 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN20P56880 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN20P56880 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN20P56880 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN20P56880 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN20P56880 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
CLDN20P56880 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN20P56880 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN20P56880 AC139713.2-201ENST00000641328 2723 ntBASIC16.88■□□□□ 0.29
CLDN20P56880 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN20P56880 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN20P56880 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN20P56880 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CLDN20P56880 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CLDN20P56880 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CLDN20P56880 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN20P56880 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 MIR1224-201ENST00000408193 85 ntBASIC16.87■□□□□ 0.29
CLDN20P56880 AC117947.1-201ENST00000427448 529 ntBASIC16.87■□□□□ 0.29
CLDN20P56880 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN20P56880 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLDN20P56880 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN20P56880 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.87■□□□□ 0.29
CLDN20P56880 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 AL109659.2-201ENST00000606809 1674 ntBASIC16.87■□□□□ 0.29
CLDN20P56880 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDN20P56880 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN20P56880 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN20P56880 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN20P56880 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLDN20P56880 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN20P56880 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
CLDN20P56880 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN20P56880 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN20P56880 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLDN20P56880 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN20P56880 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN20P56880 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.86■□□□□ 0.29
CLDN20P56880 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 DUX4L26-201ENST00000489078 1255 ntBASIC16.86■□□□□ 0.29
CLDN20P56880 COX11P1-201ENST00000489116 835 ntBASIC16.86■□□□□ 0.29
CLDN20P56880 YBX1P2-201ENST00000489612 999 ntBASIC16.86■□□□□ 0.29
CLDN20P56880 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN20P56880 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
CLDN20P56880 WWOX-216ENST00000569818 525 ntBASIC16.86■□□□□ 0.29
CLDN20P56880 MIR3180-5-201ENST00000583743 153 ntBASIC16.86■□□□□ 0.29
CLDN20P56880 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.86■□□□□ 0.29
CLDN20P56880 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN20P56880 AC010331.1-201ENST00000611423 582 ntBASIC16.86■□□□□ 0.29
CLDN20P56880 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLDN20P56880 AL023973.1-201ENST00000624619 620 ntBASIC16.86■□□□□ 0.29
CLDN20P56880 PRORSD1P-202ENST00000563365 2154 ntBASIC16.86■□□□□ 0.29
CLDN20P56880 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN20P56880 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN20P56880 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms