Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH4P55283 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDH4P55283 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CDH4P55283 AL024508.2-201ENST00000607749 1894 ntBASIC18.79■□□□□ 0.6
CDH4P55283 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH4P55283 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDH4P55283 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDH4P55283 AC004408.2-201ENST00000623613 2777 ntBASIC18.79■□□□□ 0.6
CDH4P55283 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH4P55283 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH4P55283 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH4P55283 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.78■□□□□ 0.6
CDH4P55283 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CDH4P55283 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.78■□□□□ 0.6
CDH4P55283 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH4P55283 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CDH4P55283 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH4P55283 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDH4P55283 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH4P55283 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.78■□□□□ 0.6
CDH4P55283 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.78■□□□□ 0.6
CDH4P55283 AC011498.5-201ENST00000592027 486 ntBASIC18.78■□□□□ 0.6
CDH4P55283 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.78■□□□□ 0.6
CDH4P55283 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDH4P55283 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDH4P55283 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH4P55283 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH4P55283 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CDH4P55283 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH4P55283 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH4P55283 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH4P55283 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH4P55283 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.77■□□□□ 0.6
CDH4P55283 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH4P55283 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH4P55283 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CDH4P55283 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH4P55283 GMCL1P1-201ENST00000463439 1581 ntBASIC18.76■□□□□ 0.59
CDH4P55283 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDH4P55283 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDH4P55283 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH4P55283 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH4P55283 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH4P55283 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH4P55283 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH4P55283 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CDH4P55283 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH4P55283 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH4P55283 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH4P55283 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH4P55283 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CDH4P55283 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH4P55283 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CDH4P55283 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH4P55283 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH4P55283 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH4P55283 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH4P55283 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms