Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.47■□□□□ 0.39
NR1H2P55055 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.47■□□□□ 0.39
NR1H2P55055 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.47■□□□□ 0.39
NR1H2P55055 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NR1H2P55055 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.47■□□□□ 0.39
NR1H2P55055 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.47■□□□□ 0.39
NR1H2P55055 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NR1H2P55055 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.46■□□□□ 0.39
NR1H2P55055 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.46■□□□□ 0.39
NR1H2P55055 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.46■□□□□ 0.39
NR1H2P55055 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NR1H2P55055 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.46■□□□□ 0.39
NR1H2P55055 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.46■□□□□ 0.39
NR1H2P55055 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.46■□□□□ 0.39
NR1H2P55055 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.46■□□□□ 0.39
NR1H2P55055 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.46■□□□□ 0.39
NR1H2P55055 AC124016.1-201ENST00000609552 612 ntBASIC17.46■□□□□ 0.39
NR1H2P55055 AC110285.5-201ENST00000611501 352 ntBASIC17.46■□□□□ 0.39
NR1H2P55055 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 AL023875.1-201ENST00000640777 796 ntBASIC17.46■□□□□ 0.39
NR1H2P55055 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NR1H2P55055 AC018695.7-201ENST00000624587 2492 ntBASIC17.46■□□□□ 0.39
NR1H2P55055 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
NR1H2P55055 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
NR1H2P55055 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NR1H2P55055 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.46■□□□□ 0.39
NR1H2P55055 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.46■□□□□ 0.39
NR1H2P55055 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NR1H2P55055 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.46■□□□□ 0.38
NR1H2P55055 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.46■□□□□ 0.38
NR1H2P55055 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.46■□□□□ 0.38
NR1H2P55055 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
NR1H2P55055 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NR1H2P55055 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.45■□□□□ 0.38
NR1H2P55055 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.45■□□□□ 0.38
NR1H2P55055 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.45■□□□□ 0.38
NR1H2P55055 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NR1H2P55055 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NR1H2P55055 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.45■□□□□ 0.38
NR1H2P55055 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.45■□□□□ 0.38
NR1H2P55055 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.45■□□□□ 0.38
NR1H2P55055 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.45■□□□□ 0.38
NR1H2P55055 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.45■□□□□ 0.38
NR1H2P55055 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NR1H2P55055 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.45■□□□□ 0.38
NR1H2P55055 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
NR1H2P55055 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NR1H2P55055 KRT8P20-201ENST00000423953 1409 ntBASIC17.45■□□□□ 0.38
NR1H2P55055 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
NR1H2P55055 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H2P55055 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.44■□□□□ 0.38
NR1H2P55055 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms