Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RAD23BP54727 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RAD23BP54727 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.67■□□□□ 0.74
RAD23BP54727 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RAD23BP54727 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 AK4P3-201ENST00000418260 669 ntBASIC19.67■□□□□ 0.74
RAD23BP54727 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.67■□□□□ 0.74
RAD23BP54727 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.67■□□□□ 0.74
RAD23BP54727 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.67■□□□□ 0.74
RAD23BP54727 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RAD23BP54727 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.67■□□□□ 0.74
RAD23BP54727 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RAD23BP54727 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.67■□□□□ 0.74
RAD23BP54727 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.67■□□□□ 0.74
RAD23BP54727 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 MIR3180-4-201ENST00000582223 153 ntBASIC19.67■□□□□ 0.74
RAD23BP54727 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.67■□□□□ 0.74
RAD23BP54727 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.67■□□□□ 0.74
RAD23BP54727 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RAD23BP54727 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.67■□□□□ 0.74
RAD23BP54727 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAD23BP54727 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.67■□□□□ 0.74
RAD23BP54727 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAD23BP54727 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
RAD23BP54727 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RAD23BP54727 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
RAD23BP54727 AC104581.1-202ENST00000635932 2618 ntBASIC19.66■□□□□ 0.74
RAD23BP54727 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.66■□□□□ 0.74
RAD23BP54727 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 RNF152P1-201ENST00000397754 604 ntBASIC19.66■□□□□ 0.74
RAD23BP54727 TSPY5P-201ENST00000426936 936 ntBASIC19.66■□□□□ 0.74
RAD23BP54727 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.66■□□□□ 0.74
RAD23BP54727 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.66■□□□□ 0.74
RAD23BP54727 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 MIR3917-201ENST00000580971 93 ntBASIC19.66■□□□□ 0.74
RAD23BP54727 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.66■□□□□ 0.74
RAD23BP54727 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.66■□□□□ 0.74
RAD23BP54727 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.66■□□□□ 0.74
RAD23BP54727 LTB4R2-202ENST00000528054 3092 ntBASIC19.66■□□□□ 0.74
RAD23BP54727 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.66■□□□□ 0.74
RAD23BP54727 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.66■□□□□ 0.74
RAD23BP54727 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.66■□□□□ 0.74
RAD23BP54727 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAD23BP54727 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RAD23BP54727 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 AC009113.1-201ENST00000570267 2443 ntBASIC19.65■□□□□ 0.74
RAD23BP54727 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAD23BP54727 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.65■□□□□ 0.74
RAD23BP54727 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.65■□□□□ 0.74
RAD23BP54727 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RAD23BP54727 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.65■□□□□ 0.74
RAD23BP54727 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.65■□□□□ 0.74
RAD23BP54727 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.65■□□□□ 0.74
RAD23BP54727 AL157888.1-201ENST00000631930 593 ntBASIC19.65■□□□□ 0.74
RAD23BP54727 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 AC020763.4-201ENST00000623414 4170 ntBASIC19.65■□□□□ 0.74
RAD23BP54727 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
RAD23BP54727 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.65■□□□□ 0.74
RAD23BP54727 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.65■□□□□ 0.74
RAD23BP54727 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD23BP54727 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms