Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.79■□□□□ 0.6
ATXN3P54252 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ATXN3P54252 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.79■□□□□ 0.6
ATXN3P54252 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATXN3P54252 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ATXN3P54252 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.79■□□□□ 0.6
ATXN3P54252 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.78■□□□□ 0.6
ATXN3P54252 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.78■□□□□ 0.6
ATXN3P54252 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.78■□□□□ 0.6
ATXN3P54252 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.78■□□□□ 0.6
ATXN3P54252 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.78■□□□□ 0.6
ATXN3P54252 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
ATXN3P54252 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.78■□□□□ 0.6
ATXN3P54252 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.78■□□□□ 0.6
ATXN3P54252 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.78■□□□□ 0.6
ATXN3P54252 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.78■□□□□ 0.6
ATXN3P54252 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATXN3P54252 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
ATXN3P54252 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATXN3P54252 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3P54252 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.77■□□□□ 0.6
ATXN3P54252 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 LTB4R2-202ENST00000528054 3092 ntBASIC18.77■□□□□ 0.6
ATXN3P54252 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATXN3P54252 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.77■□□□□ 0.6
ATXN3P54252 BX276092.5-203ENST00000456199 560 ntBASIC18.77■□□□□ 0.6
ATXN3P54252 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.77■□□□□ 0.6
ATXN3P54252 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.77■□□□□ 0.6
ATXN3P54252 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.77■□□□□ 0.6
ATXN3P54252 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.77■□□□□ 0.6
ATXN3P54252 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.77■□□□□ 0.6
ATXN3P54252 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3P54252 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATXN3P54252 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATXN3P54252 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATXN3P54252 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ATXN3P54252 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATXN3P54252 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ATXN3P54252 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.77■□□□□ 0.59
ATXN3P54252 AL138781.2-201ENST00000617896 1843 ntBASIC18.77■□□□□ 0.59
ATXN3P54252 AC009237.14-201ENST00000609975 1594 ntBASIC18.76■□□□□ 0.59
ATXN3P54252 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3P54252 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.76■□□□□ 0.59
ATXN3P54252 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3P54252 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3P54252 KRT8P11-201ENST00000409686 1436 ntBASIC18.76■□□□□ 0.59
ATXN3P54252 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3P54252 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3P54252 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3P54252 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3P54252 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.76■□□□□ 0.59
ATXN3P54252 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3P54252 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3P54252 AL845331.1-201ENST00000424978 1190 ntBASIC18.76■□□□□ 0.59
ATXN3P54252 AC246785.2-201ENST00000432512 513 ntBASIC18.76■□□□□ 0.59
ATXN3P54252 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.76■□□□□ 0.59
ATXN3P54252 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.76■□□□□ 0.59
ATXN3P54252 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3P54252 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.76■□□□□ 0.59
ATXN3P54252 AL121672.3-201ENST00000608644 468 ntBASIC18.76■□□□□ 0.59
ATXN3P54252 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms