Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF144AP50876 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 AC007663.1-201ENST00000438948 1240 ntBASIC17.13■□□□□ 0.33
RNF144AP50876 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 BX088651.1-201ENST00000540551 451 ntBASIC17.13■□□□□ 0.33
RNF144AP50876 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF144AP50876 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF144AP50876 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF144AP50876 AL109659.2-201ENST00000606809 1674 ntBASIC17.13■□□□□ 0.33
RNF144AP50876 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF144AP50876 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF144AP50876 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF144AP50876 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF144AP50876 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RNF144AP50876 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF144AP50876 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF144AP50876 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF144AP50876 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF144AP50876 C2orf69P3-201ENST00000565542 1120 ntBASIC17.12■□□□□ 0.33
RNF144AP50876 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF144AP50876 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RNF144AP50876 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF144AP50876 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF144AP50876 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 KRT8P45-201ENST00000414328 1447 ntBASIC17.12■□□□□ 0.33
RNF144AP50876 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 AC005332.8-201ENST00000622750 2735 ntBASIC17.12■□□□□ 0.33
RNF144AP50876 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF144AP50876 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RNF144AP50876 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF144AP50876 BCL2-203ENST00000589955 5011 ntBASIC17.11■□□□□ 0.33
RNF144AP50876 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RNF144AP50876 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF144AP50876 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF144AP50876 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.11■□□□□ 0.33
RNF144AP50876 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
RNF144AP50876 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF144AP50876 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF144AP50876 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF144AP50876 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF144AP50876 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF144AP50876 NAPSB-206ENST00000562112 1266 ntBASIC17.11■□□□□ 0.33
RNF144AP50876 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
RNF144AP50876 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF144AP50876 AL354751.1-201ENST00000412768 1863 ntBASIC17.11■□□□□ 0.33
RNF144AP50876 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RNF144AP50876 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF144AP50876 AC092338.2-201ENST00000568827 1415 ntBASIC17.11■□□□□ 0.33
RNF144AP50876 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF144AP50876 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF144AP50876 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF144AP50876 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
RNF144AP50876 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF144AP50876 SLC25A1P2-201ENST00000430693 912 ntBASIC17.1■□□□□ 0.33
RNF144AP50876 AL353719.1-201ENST00000566847 864 ntBASIC17.1■□□□□ 0.33
RNF144AP50876 CR769767.2-201ENST00000622735 460 ntBASIC17.1■□□□□ 0.33
RNF144AP50876 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF144AP50876 AC116562.4-202ENST00000641738 218 ntBASIC17.1■□□□□ 0.33
RNF144AP50876 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF144AP50876 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF144AP50876 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RNF144AP50876 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF144AP50876 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF144AP50876 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF144AP50876 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RNF144AP50876 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF144AP50876 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF144AP50876 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF144AP50876 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF144AP50876 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF144AP50876 MIR564-202ENST00000385049 94 ntBASIC17.09■□□□□ 0.33
RNF144AP50876 AC087499.1-201ENST00000418141 1075 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms