Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.85■□□□□ 0.61
GRIA4P48058 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GRIA4P48058 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
GRIA4P48058 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.85■□□□□ 0.61
GRIA4P48058 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.85■□□□□ 0.61
GRIA4P48058 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.85■□□□□ 0.61
GRIA4P48058 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.85■□□□□ 0.61
GRIA4P48058 ZNF444P1-201ENST00000559497 298 ntBASIC18.85■□□□□ 0.61
GRIA4P48058 MIR3180-5-201ENST00000583743 153 ntBASIC18.85■□□□□ 0.61
GRIA4P48058 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GRIA4P48058 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.85■□□□□ 0.61
GRIA4P48058 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.85■□□□□ 0.61
GRIA4P48058 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GRIA4P48058 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GRIA4P48058 AC090164.3-201ENST00000610780 2143 ntBASIC18.85■□□□□ 0.61
GRIA4P48058 MTMR9LP-203ENST00000426597 1545 ntBASIC18.84■□□□□ 0.61
GRIA4P48058 AC008556.1-201ENST00000610908 2040 ntBASIC18.84■□□□□ 0.61
GRIA4P48058 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.84■□□□□ 0.61
GRIA4P48058 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.84■□□□□ 0.61
GRIA4P48058 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GRIA4P48058 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GRIA4P48058 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.84■□□□□ 0.61
GRIA4P48058 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.84■□□□□ 0.61
GRIA4P48058 HCG4P8-203ENST00000443049 980 ntBASIC18.84■□□□□ 0.61
GRIA4P48058 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.84■□□□□ 0.61
GRIA4P48058 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.84■□□□□ 0.61
GRIA4P48058 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.84■□□□□ 0.61
GRIA4P48058 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GRIA4P48058 GCSHP2-201ENST00000560971 527 ntBASIC18.84■□□□□ 0.61
GRIA4P48058 AC083849.1-201ENST00000615227 514 ntBASIC18.84■□□□□ 0.61
GRIA4P48058 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GRIA4P48058 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.84■□□□□ 0.61
GRIA4P48058 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.84■□□□□ 0.61
GRIA4P48058 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GRIA4P48058 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GRIA4P48058 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GRIA4P48058 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GRIA4P48058 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.84■□□□□ 0.61
GRIA4P48058 AC005082.1-201ENST00000413042 2259 ntBASIC18.84■□□□□ 0.61
GRIA4P48058 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
GRIA4P48058 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.84■□□□□ 0.61
GRIA4P48058 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GRIA4P48058 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.83■□□□□ 0.61
GRIA4P48058 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GRIA4P48058 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
GRIA4P48058 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.83■□□□□ 0.61
GRIA4P48058 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.83■□□□□ 0.61
GRIA4P48058 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GRIA4P48058 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.83■□□□□ 0.61
GRIA4P48058 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GRIA4P48058 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
GRIA4P48058 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GRIA4P48058 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.83■□□□□ 0.6
GRIA4P48058 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GRIA4P48058 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
GRIA4P48058 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.83■□□□□ 0.6
GRIA4P48058 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
GRIA4P48058 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GRIA4P48058 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
GRIA4P48058 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GRIA4P48058 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.83■□□□□ 0.6
GRIA4P48058 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.83■□□□□ 0.6
GRIA4P48058 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GRIA4P48058 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
GRIA4P48058 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
GRIA4P48058 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.83■□□□□ 0.6
GRIA4P48058 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GRIA4P48058 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.82■□□□□ 0.6
GRIA4P48058 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
GRIA4P48058 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
GRIA4P48058 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GRIA4P48058 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GRIA4P48058 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIA4P48058 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GRIA4P48058 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.82■□□□□ 0.6
GRIA4P48058 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIA4P48058 AC036111.1-201ENST00000533973 1582 ntBASIC18.82■□□□□ 0.6
GRIA4P48058 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.82■□□□□ 0.6
GRIA4P48058 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIA4P48058 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIA4P48058 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIA4P48058 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIA4P48058 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.82■□□□□ 0.6
GRIA4P48058 DUSP5P1-201ENST00000441325 1139 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms