Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.05■□□□□ 0.16
GDNFP39905 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.05■□□□□ 0.16
GDNFP39905 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.05■□□□□ 0.16
GDNFP39905 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
GDNFP39905 YBX1P10-201ENST00000444752 975 ntBASIC16.05■□□□□ 0.16
GDNFP39905 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.05■□□□□ 0.16
GDNFP39905 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.05■□□□□ 0.16
GDNFP39905 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.05■□□□□ 0.16
GDNFP39905 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.05■□□□□ 0.16
GDNFP39905 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.05■□□□□ 0.16
GDNFP39905 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.05■□□□□ 0.16
GDNFP39905 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
GDNFP39905 AC073648.6-201ENST00000641589 218 ntBASIC16.05■□□□□ 0.16
GDNFP39905 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GDNFP39905 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
GDNFP39905 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.05■□□□□ 0.16
GDNFP39905 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GDNFP39905 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 AC093677.2-201ENST00000600169 1863 ntBASIC16.04■□□□□ 0.16
GDNFP39905 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.04■□□□□ 0.16
GDNFP39905 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GDNFP39905 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 POU5F1P3-201ENST00000428824 1078 ntBASIC16.04■□□□□ 0.16
GDNFP39905 TSPY20P-201ENST00000450910 630 ntBASIC16.04■□□□□ 0.16
GDNFP39905 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.04■□□□□ 0.16
GDNFP39905 AL023875.1-201ENST00000640777 796 ntBASIC16.04■□□□□ 0.16
GDNFP39905 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.04■□□□□ 0.16
GDNFP39905 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.04■□□□□ 0.16
GDNFP39905 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GDNFP39905 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
GDNFP39905 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.03■□□□□ 0.16
GDNFP39905 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.03■□□□□ 0.16
GDNFP39905 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.03■□□□□ 0.16
GDNFP39905 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
GDNFP39905 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.03■□□□□ 0.16
GDNFP39905 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GDNFP39905 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.03■□□□□ 0.16
GDNFP39905 AC128676.1-201ENST00000454392 318 ntBASIC16.03■□□□□ 0.16
GDNFP39905 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.03■□□□□ 0.16
GDNFP39905 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GDNFP39905 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms