Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.79■□□□□ 0.6
FDFT1P37268 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 AC020916.1-201ENST00000587762 1774 ntBASIC18.79■□□□□ 0.6
FDFT1P37268 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.79■□□□□ 0.6
FDFT1P37268 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.79■□□□□ 0.6
FDFT1P37268 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.79■□□□□ 0.6
FDFT1P37268 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.79■□□□□ 0.6
FDFT1P37268 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.79■□□□□ 0.6
FDFT1P37268 WWOX-216ENST00000569818 525 ntBASIC18.79■□□□□ 0.6
FDFT1P37268 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.79■□□□□ 0.6
FDFT1P37268 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
FDFT1P37268 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
FDFT1P37268 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.79■□□□□ 0.6
FDFT1P37268 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
FDFT1P37268 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 AL163051.1-201ENST00000569214 1512 ntBASIC18.79■□□□□ 0.6
FDFT1P37268 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FDFT1P37268 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
FDFT1P37268 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FDFT1P37268 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
FDFT1P37268 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FDFT1P37268 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
FDFT1P37268 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FDFT1P37268 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FDFT1P37268 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FDFT1P37268 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
FDFT1P37268 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FDFT1P37268 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FDFT1P37268 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FDFT1P37268 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FDFT1P37268 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FDFT1P37268 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.78■□□□□ 0.6
FDFT1P37268 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FDFT1P37268 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
FDFT1P37268 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.78■□□□□ 0.6
FDFT1P37268 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.78■□□□□ 0.6
FDFT1P37268 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
FDFT1P37268 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.78■□□□□ 0.6
FDFT1P37268 AP000525.1-201ENST00000608286 694 ntBASIC18.78■□□□□ 0.6
FDFT1P37268 AP006294.2-201ENST00000641667 209 ntBASIC18.78■□□□□ 0.6
FDFT1P37268 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
FDFT1P37268 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.78■□□□□ 0.6
FDFT1P37268 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FDFT1P37268 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FDFT1P37268 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FDFT1P37268 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.77■□□□□ 0.6
FDFT1P37268 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.77■□□□□ 0.6
FDFT1P37268 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.77■□□□□ 0.6
FDFT1P37268 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
FDFT1P37268 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.77■□□□□ 0.6
FDFT1P37268 AC092338.2-201ENST00000568827 1415 ntBASIC18.77■□□□□ 0.6
FDFT1P37268 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
FDFT1P37268 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
FDFT1P37268 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.77■□□□□ 0.6
FDFT1P37268 KRT18P23-201ENST00000435622 1283 ntBASIC18.77■□□□□ 0.6
FDFT1P37268 BX088651.1-201ENST00000540551 451 ntBASIC18.77■□□□□ 0.6
FDFT1P37268 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
FDFT1P37268 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.77■□□□□ 0.6
FDFT1P37268 CR769767.2-201ENST00000622735 460 ntBASIC18.77■□□□□ 0.6
FDFT1P37268 AC116562.4-202ENST00000641738 218 ntBASIC18.77■□□□□ 0.6
FDFT1P37268 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FDFT1P37268 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
FDFT1P37268 AC009102.3-201ENST00000623118 1491 ntBASIC18.77■□□□□ 0.59
FDFT1P37268 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FDFT1P37268 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
FDFT1P37268 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FDFT1P37268 KRT17P2-201ENST00000300992 1314 ntBASIC18.76■□□□□ 0.59
FDFT1P37268 PCDHB18P-201ENST00000524813 2368 ntBASIC18.76■□□□□ 0.59
FDFT1P37268 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FDFT1P37268 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FDFT1P37268 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FDFT1P37268 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FDFT1P37268 MIR149-201ENST00000384879 89 ntBASIC18.76■□□□□ 0.59
FDFT1P37268 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.76■□□□□ 0.59
FDFT1P37268 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
FDFT1P37268 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.76■□□□□ 0.59
FDFT1P37268 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.76■□□□□ 0.59
FDFT1P37268 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FDFT1P37268 C2orf69P3-201ENST00000565542 1120 ntBASIC18.76■□□□□ 0.59
FDFT1P37268 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.76■□□□□ 0.59
FDFT1P37268 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
FDFT1P37268 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms