Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SCNN1AP37088 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.14■□□□□ 0.65
SCNN1AP37088 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.13■□□□□ 0.65
SCNN1AP37088 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 AC092647.4-201ENST00000457211 535 ntBASIC19.13■□□□□ 0.65
SCNN1AP37088 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.13■□□□□ 0.65
SCNN1AP37088 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.13■□□□□ 0.65
SCNN1AP37088 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.13■□□□□ 0.65
SCNN1AP37088 HYMAI.1-201ENST00000620949 238 ntBASIC19.13■□□□□ 0.65
SCNN1AP37088 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SCNN1AP37088 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCNN1AP37088 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.13■□□□□ 0.65
SCNN1AP37088 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
SCNN1AP37088 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.13■□□□□ 0.65
SCNN1AP37088 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.12■□□□□ 0.65
SCNN1AP37088 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.12■□□□□ 0.65
SCNN1AP37088 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.12■□□□□ 0.65
SCNN1AP37088 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SCNN1AP37088 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.12■□□□□ 0.65
SCNN1AP37088 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 HBZP1-201ENST00000354915 429 ntBASIC19.12■□□□□ 0.65
SCNN1AP37088 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.12■□□□□ 0.65
SCNN1AP37088 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
SCNN1AP37088 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.12■□□□□ 0.65
SCNN1AP37088 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.12■□□□□ 0.65
SCNN1AP37088 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.12■□□□□ 0.65
SCNN1AP37088 AC024563.2-201ENST00000603282 481 ntBASIC19.12■□□□□ 0.65
SCNN1AP37088 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.12■□□□□ 0.65
SCNN1AP37088 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.12■□□□□ 0.65
SCNN1AP37088 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SCNN1AP37088 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.12■□□□□ 0.65
SCNN1AP37088 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SCNN1AP37088 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.12■□□□□ 0.65
SCNN1AP37088 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCNN1AP37088 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.11■□□□□ 0.65
SCNN1AP37088 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SCNN1AP37088 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.11■□□□□ 0.65
SCNN1AP37088 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.11■□□□□ 0.65
SCNN1AP37088 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.11■□□□□ 0.65
SCNN1AP37088 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.11■□□□□ 0.65
SCNN1AP37088 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
SCNN1AP37088 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.11■□□□□ 0.65
SCNN1AP37088 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SCNN1AP37088 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCNN1AP37088 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCNN1AP37088 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SCNN1AP37088 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCNN1AP37088 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SCNN1AP37088 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCNN1AP37088 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCNN1AP37088 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCNN1AP37088 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCNN1AP37088 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.1■□□□□ 0.65
SCNN1AP37088 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms