Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.46■□□□□ 0.71
CTNNA1P35221 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.46■□□□□ 0.71
CTNNA1P35221 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNNA1P35221 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.46■□□□□ 0.71
CTNNA1P35221 AC012313.1-201ENST00000593393 3059 ntBASIC19.46■□□□□ 0.71
CTNNA1P35221 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CTNNA1P35221 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.46■□□□□ 0.71
CTNNA1P35221 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.46■□□□□ 0.71
CTNNA1P35221 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTNNA1P35221 FSCN1P1-201ENST00000568912 1481 ntBASIC19.46■□□□□ 0.71
CTNNA1P35221 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNNA1P35221 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CTNNA1P35221 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.46■□□□□ 0.71
CTNNA1P35221 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.46■□□□□ 0.71
CTNNA1P35221 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.46■□□□□ 0.71
CTNNA1P35221 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTNNA1P35221 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNNA1P35221 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.45■□□□□ 0.7
CTNNA1P35221 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 AL359736.2-201ENST00000621992 437 ntBASIC19.45■□□□□ 0.7
CTNNA1P35221 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CTNNA1P35221 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 ESPNP-201ENST00000270691 2015 ntBASIC19.45■□□□□ 0.7
CTNNA1P35221 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CTNNA1P35221 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNNA1P35221 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNNA1P35221 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNNA1P35221 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.45■□□□□ 0.7
CTNNA1P35221 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.44■□□□□ 0.7
CTNNA1P35221 AC096733.2-201ENST00000609937 1394 ntBASIC19.44■□□□□ 0.7
CTNNA1P35221 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.44■□□□□ 0.7
CTNNA1P35221 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 AC139713.2-201ENST00000641328 2723 ntBASIC19.44■□□□□ 0.7
CTNNA1P35221 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.44■□□□□ 0.7
CTNNA1P35221 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNNA1P35221 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CTNNA1P35221 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.44■□□□□ 0.7
CTNNA1P35221 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CTNNA1P35221 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.44■□□□□ 0.7
CTNNA1P35221 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.44■□□□□ 0.7
CTNNA1P35221 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNNA1P35221 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNNA1P35221 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CTNNA1P35221 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNNA1P35221 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNNA1P35221 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CTNNA1P35221 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNNA1P35221 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNNA1P35221 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNNA1P35221 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.43■□□□□ 0.7
CTNNA1P35221 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CTNNA1P35221 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CTNNA1P35221 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CTNNA1P35221 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.43■□□□□ 0.7
CTNNA1P35221 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTNNA1P35221 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.43■□□□□ 0.7
CTNNA1P35221 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.43■□□□□ 0.7
CTNNA1P35221 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CTNNA1P35221 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.43■□□□□ 0.7
CTNNA1P35221 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CTNNA1P35221 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNNA1P35221 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms