Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.92■□□□□ 0.94
CNGA1P29973 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CNGA1P29973 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.92■□□□□ 0.94
CNGA1P29973 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CNGA1P29973 MINOS1P3-201ENST00000457048 203 ntBASIC20.92■□□□□ 0.94
CNGA1P29973 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CNGA1P29973 AF238378.1-201ENST00000526806 358 ntBASIC20.92■□□□□ 0.94
CNGA1P29973 AP001005.1-201ENST00000571755 1248 ntBASIC20.92■□□□□ 0.94
CNGA1P29973 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.92■□□□□ 0.94
CNGA1P29973 AC024563.2-201ENST00000603282 481 ntBASIC20.92■□□□□ 0.94
CNGA1P29973 REXO1L6P-202ENST00000619970 1078 ntBASIC20.92■□□□□ 0.94
CNGA1P29973 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.92■□□□□ 0.94
CNGA1P29973 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.92■□□□□ 0.94
CNGA1P29973 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.92■□□□□ 0.94
CNGA1P29973 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CNGA1P29973 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CNGA1P29973 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.92■□□□□ 0.94
CNGA1P29973 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CNGA1P29973 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CNGA1P29973 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.92■□□□□ 0.94
CNGA1P29973 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.92■□□□□ 0.94
CNGA1P29973 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CNGA1P29973 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
CNGA1P29973 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNGA1P29973 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNGA1P29973 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CNGA1P29973 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNGA1P29973 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CNGA1P29973 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CNGA1P29973 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNGA1P29973 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNGA1P29973 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.91■□□□□ 0.94
CNGA1P29973 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CNGA1P29973 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.91■□□□□ 0.94
CNGA1P29973 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.91■□□□□ 0.94
CNGA1P29973 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.91■□□□□ 0.94
CNGA1P29973 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNGA1P29973 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.91■□□□□ 0.94
CNGA1P29973 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.91■□□□□ 0.94
CNGA1P29973 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.91■□□□□ 0.94
CNGA1P29973 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.91■□□□□ 0.94
CNGA1P29973 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.91■□□□□ 0.94
CNGA1P29973 AC139530.3-201ENST00000620344 690 ntBASIC20.91■□□□□ 0.94
CNGA1P29973 AC117500.6-201ENST00000624871 588 ntBASIC20.91■□□□□ 0.94
CNGA1P29973 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.91■□□□□ 0.94
CNGA1P29973 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CNGA1P29973 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNGA1P29973 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.9■□□□□ 0.94
CNGA1P29973 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 AC006333.2-201ENST00000607957 2099 ntBASIC20.9■□□□□ 0.94
CNGA1P29973 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.9■□□□□ 0.94
CNGA1P29973 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 AC034236.2-201ENST00000606662 1610 ntBASIC20.9■□□□□ 0.94
CNGA1P29973 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CNGA1P29973 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
CNGA1P29973 IL9RP2-201ENST00000423948 1312 ntBASIC20.9■□□□□ 0.94
CNGA1P29973 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 KRT18P13-201ENST00000400056 1290 ntBASIC20.9■□□□□ 0.94
CNGA1P29973 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CNGA1P29973 PMS2P1-201ENST00000431037 1228 ntBASIC20.9■□□□□ 0.94
CNGA1P29973 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.9■□□□□ 0.94
CNGA1P29973 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.9■□□□□ 0.94
CNGA1P29973 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.9■□□□□ 0.94
CNGA1P29973 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.9■□□□□ 0.94
CNGA1P29973 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.9■□□□□ 0.94
CNGA1P29973 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.9■□□□□ 0.94
CNGA1P29973 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.9■□□□□ 0.94
CNGA1P29973 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.9■□□□□ 0.94
CNGA1P29973 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNGA1P29973 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNGA1P29973 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CNGA1P29973 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.89■□□□□ 0.94
CNGA1P29973 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNGA1P29973 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNGA1P29973 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms