Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.11■□□□□ 0.49
VARSP26640 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
VARSP26640 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.11■□□□□ 0.49
VARSP26640 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.11■□□□□ 0.49
VARSP26640 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
VARSP26640 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VARSP26640 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 NOC2LP2-201ENST00000407594 1944 ntBASIC18.11■□□□□ 0.49
VARSP26640 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
VARSP26640 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.11■□□□□ 0.49
VARSP26640 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.1■□□□□ 0.49
VARSP26640 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.1■□□□□ 0.49
VARSP26640 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.1■□□□□ 0.49
VARSP26640 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.1■□□□□ 0.49
VARSP26640 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
VARSP26640 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.1■□□□□ 0.49
VARSP26640 LIN28AP1-201ENST00000429574 405 ntBASIC18.1■□□□□ 0.49
VARSP26640 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 LINC01238-205ENST00000567549 1107 ntBASIC18.1■□□□□ 0.49
VARSP26640 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VARSP26640 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.1■□□□□ 0.49
VARSP26640 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARSP26640 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.1■□□□□ 0.49
VARSP26640 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VARSP26640 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.09■□□□□ 0.49
VARSP26640 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.09■□□□□ 0.49
VARSP26640 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VARSP26640 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.09■□□□□ 0.49
VARSP26640 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VARSP26640 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 TERF1P1-201ENST00000311003 1181 ntBASIC18.09■□□□□ 0.49
VARSP26640 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
VARSP26640 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 SLC25A3P1-201ENST00000443844 931 ntBASIC18.09■□□□□ 0.49
VARSP26640 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.09■□□□□ 0.49
VARSP26640 C2orf69P3-201ENST00000565542 1120 ntBASIC18.09■□□□□ 0.49
VARSP26640 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.09■□□□□ 0.49
VARSP26640 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
VARSP26640 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.09■□□□□ 0.49
VARSP26640 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.09■□□□□ 0.49
VARSP26640 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
VARSP26640 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.09■□□□□ 0.49
VARSP26640 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
VARSP26640 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.09■□□□□ 0.49
VARSP26640 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARSP26640 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VARSP26640 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VARSP26640 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.08■□□□□ 0.49
VARSP26640 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VARSP26640 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.08■□□□□ 0.49
VARSP26640 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VARSP26640 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VARSP26640 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
VARSP26640 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VARSP26640 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.08■□□□□ 0.48
VARSP26640 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VARSP26640 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.08■□□□□ 0.48
VARSP26640 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VARSP26640 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.08■□□□□ 0.48
VARSP26640 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.08■□□□□ 0.48
VARSP26640 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VARSP26640 AC068880.1-201ENST00000507289 2297 ntBASIC18.08■□□□□ 0.48
VARSP26640 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VARSP26640 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VARSP26640 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.08■□□□□ 0.48
VARSP26640 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms