Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.28■■□□□ 1
ERCC3P19447 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.28■■□□□ 1
ERCC3P19447 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.28■■□□□ 1
ERCC3P19447 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ERCC3P19447 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.28■■□□□ 1
ERCC3P19447 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.28■■□□□ 1
ERCC3P19447 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.28■■□□□ 1
ERCC3P19447 MIR3180-4-201ENST00000582223 153 ntBASIC21.28■■□□□ 1
ERCC3P19447 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.28■■□□□ 1
ERCC3P19447 IGHV3-41-201ENST00000613121 348 ntBASIC21.28■■□□□ 1
ERCC3P19447 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.28■■□□□ 1
ERCC3P19447 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.28■■□□□ 1
ERCC3P19447 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.28■■□□□ 1
ERCC3P19447 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ERCC3P19447 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.27■■□□□ 1
ERCC3P19447 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.27■■□□□ 1
ERCC3P19447 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
ERCC3P19447 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ERCC3P19447 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.27■■□□□ 1
ERCC3P19447 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.27■■□□□ 1
ERCC3P19447 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ERCC3P19447 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.27■■□□□ 1
ERCC3P19447 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.27■■□□□ 1
ERCC3P19447 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ERCC3P19447 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
ERCC3P19447 AC009078.2-202ENST00000463353 338 ntBASIC21.27■■□□□ 1
ERCC3P19447 KRT18P31-201ENST00000506277 1292 ntBASIC21.27■■□□□ 1
ERCC3P19447 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.27■■□□□ 1
ERCC3P19447 AL031008.1-201ENST00000619963 541 ntBASIC21.27■■□□□ 1
ERCC3P19447 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.27■■□□□ 1
ERCC3P19447 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.27■■□□□ 1
ERCC3P19447 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ERCC3P19447 AC018445.3-201ENST00000624177 1945 ntBASIC21.27■■□□□ 1
ERCC3P19447 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.27■■□□□ 1
ERCC3P19447 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
ERCC3P19447 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.27■□□□□ 0.99
ERCC3P19447 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.26■□□□□ 0.99
ERCC3P19447 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.26■□□□□ 0.99
ERCC3P19447 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ERCC3P19447 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.26■□□□□ 0.99
ERCC3P19447 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 AP000347.1-202ENST00000435868 847 ntBASIC21.26■□□□□ 0.99
ERCC3P19447 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.26■□□□□ 0.99
ERCC3P19447 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.26■□□□□ 0.99
ERCC3P19447 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.26■□□□□ 0.99
ERCC3P19447 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.26■□□□□ 0.99
ERCC3P19447 AC104692.2-201ENST00000603054 253 ntBASIC21.26■□□□□ 0.99
ERCC3P19447 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 AC004408.2-201ENST00000623613 2777 ntBASIC21.26■□□□□ 0.99
ERCC3P19447 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 FP475955.4-201ENST00000623131 1990 ntBASIC21.26■□□□□ 0.99
ERCC3P19447 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.26■□□□□ 0.99
ERCC3P19447 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.26■□□□□ 0.99
ERCC3P19447 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC3P19447 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
ERCC3P19447 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
ERCC3P19447 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ERCC3P19447 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.25■□□□□ 0.99
ERCC3P19447 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.25■□□□□ 0.99
ERCC3P19447 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.25■□□□□ 0.99
ERCC3P19447 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 AC104819.1-201ENST00000504587 486 ntBASIC21.25■□□□□ 0.99
ERCC3P19447 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.25■□□□□ 0.99
ERCC3P19447 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ERCC3P19447 GPR32P1-201ENST00000601788 811 ntBASIC21.25■□□□□ 0.99
ERCC3P19447 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.25■□□□□ 0.99
ERCC3P19447 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ERCC3P19447 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
ERCC3P19447 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms