Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC2P18074 AC135050.7-201ENST00000624508 2218 ntBASIC18.96■□□□□ 0.63
ERCC2P18074 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ERCC2P18074 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.95■□□□□ 0.62
ERCC2P18074 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC2P18074 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ERCC2P18074 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC2P18074 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC2P18074 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC2P18074 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC2P18074 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC2P18074 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.95■□□□□ 0.62
ERCC2P18074 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC2P18074 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC2P18074 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ERCC2P18074 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.95■□□□□ 0.62
ERCC2P18074 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC2P18074 AC009065.1-201ENST00000564055 1225 ntBASIC18.95■□□□□ 0.62
ERCC2P18074 AL441883.1-201ENST00000566170 1045 ntBASIC18.95■□□□□ 0.62
ERCC2P18074 MIR3917-201ENST00000580971 93 ntBASIC18.95■□□□□ 0.62
ERCC2P18074 AC139887.4-201ENST00000607877 719 ntBASIC18.95■□□□□ 0.62
ERCC2P18074 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.95■□□□□ 0.62
ERCC2P18074 AC092865.7-201ENST00000641832 219 ntBASIC18.95■□□□□ 0.62
ERCC2P18074 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.95■□□□□ 0.62
ERCC2P18074 ESPNP-201ENST00000270691 2015 ntBASIC18.95■□□□□ 0.62
ERCC2P18074 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.95■□□□□ 0.62
ERCC2P18074 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ERCC2P18074 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.94■□□□□ 0.62
ERCC2P18074 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ERCC2P18074 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.94■□□□□ 0.62
ERCC2P18074 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ERCC2P18074 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.94■□□□□ 0.62
ERCC2P18074 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 AC117947.1-201ENST00000427448 529 ntBASIC18.94■□□□□ 0.62
ERCC2P18074 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.94■□□□□ 0.62
ERCC2P18074 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.94■□□□□ 0.62
ERCC2P18074 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.94■□□□□ 0.62
ERCC2P18074 AC011558.1-201ENST00000623459 338 ntBASIC18.94■□□□□ 0.62
ERCC2P18074 AL031432.5-201ENST00000641059 760 ntBASIC18.94■□□□□ 0.62
ERCC2P18074 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ERCC2P18074 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ERCC2P18074 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
ERCC2P18074 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.94■□□□□ 0.62
ERCC2P18074 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 AC135776.1-201ENST00000319817 2481 ntBASIC18.94■□□□□ 0.62
ERCC2P18074 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ERCC2P18074 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.94■□□□□ 0.62
ERCC2P18074 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.93■□□□□ 0.62
ERCC2P18074 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ERCC2P18074 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.93■□□□□ 0.62
ERCC2P18074 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.93■□□□□ 0.62
ERCC2P18074 YBX1P2-201ENST00000489612 999 ntBASIC18.93■□□□□ 0.62
ERCC2P18074 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ERCC2P18074 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.93■□□□□ 0.62
ERCC2P18074 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.93■□□□□ 0.62
ERCC2P18074 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.93■□□□□ 0.62
ERCC2P18074 AL157888.1-201ENST00000631930 593 ntBASIC18.93■□□□□ 0.62
ERCC2P18074 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ERCC2P18074 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.93■□□□□ 0.62
ERCC2P18074 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 AL162741.1-201ENST00000565563 1558 ntBASIC18.93■□□□□ 0.62
ERCC2P18074 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC2P18074 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.92■□□□□ 0.62
ERCC2P18074 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
ERCC2P18074 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.92■□□□□ 0.62
ERCC2P18074 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ERCC2P18074 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC2P18074 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC2P18074 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC2P18074 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms