Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCL4P13236 AC009102.3-201ENST00000623118 1491 ntBASIC17.36■□□□□ 0.37
CCL4P13236 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL4P13236 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL4P13236 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL4P13236 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
CCL4P13236 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL4P13236 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL4P13236 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL4P13236 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.35■□□□□ 0.37
CCL4P13236 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCL4P13236 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.35■□□□□ 0.37
CCL4P13236 AL590627.1-203ENST00000421194 1026 ntBASIC17.35■□□□□ 0.37
CCL4P13236 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL4P13236 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL4P13236 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL4P13236 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.35■□□□□ 0.37
CCL4P13236 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.35■□□□□ 0.37
CCL4P13236 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL4P13236 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL4P13236 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCL4P13236 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL4P13236 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL4P13236 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCL4P13236 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.34■□□□□ 0.37
CCL4P13236 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCL4P13236 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.34■□□□□ 0.37
CCL4P13236 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.34■□□□□ 0.37
CCL4P13236 FAM197Y8-203ENST00000450145 560 ntBASIC17.34■□□□□ 0.37
CCL4P13236 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.34■□□□□ 0.37
CCL4P13236 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCL4P13236 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.34■□□□□ 0.37
CCL4P13236 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCL4P13236 AC023511.2-201ENST00000618803 211 ntBASIC17.34■□□□□ 0.37
CCL4P13236 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCL4P13236 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.34■□□□□ 0.37
CCL4P13236 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL4P13236 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL4P13236 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL4P13236 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CCL4P13236 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CCL4P13236 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CCL4P13236 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.33■□□□□ 0.36
CCL4P13236 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL4P13236 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
CCL4P13236 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL4P13236 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL4P13236 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL4P13236 AC132008.2-207ENST00000454517 770 ntBASIC17.33■□□□□ 0.36
CCL4P13236 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCL4P13236 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.33■□□□□ 0.36
CCL4P13236 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.33■□□□□ 0.36
CCL4P13236 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.33■□□□□ 0.36
CCL4P13236 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.33■□□□□ 0.36
CCL4P13236 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.33■□□□□ 0.36
CCL4P13236 BX640515.1-201ENST00000617215 977 ntBASIC17.33■□□□□ 0.36
CCL4P13236 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.33■□□□□ 0.36
CCL4P13236 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCL4P13236 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCL4P13236 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.33■□□□□ 0.36
CCL4P13236 SDHAP2-201ENST00000455183 2001 ntBASIC17.33■□□□□ 0.36
CCL4P13236 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL4P13236 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCL4P13236 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCL4P13236 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.33■□□□□ 0.36
CCL4P13236 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCL4P13236 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL4P13236 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCL4P13236 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL4P13236 AC073130.3-201ENST00000624389 2278 ntBASIC17.32■□□□□ 0.36
CCL4P13236 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.32■□□□□ 0.36
CCL4P13236 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCL4P13236 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms